从临床记录中自动提取纽约心脏协会分类的方法。

Rui Zhang, Sisi Ma, Liesa Shanahan, Jessica Munroe, Sarah Horn, Stuart Speedie
{"title":"从临床记录中自动提取纽约心脏协会分类的方法。","authors":"Rui Zhang,&nbsp;Sisi Ma,&nbsp;Liesa Shanahan,&nbsp;Jessica Munroe,&nbsp;Sarah Horn,&nbsp;Stuart Speedie","doi":"10.1109/BIBM.2017.8217848","DOIUrl":null,"url":null,"abstract":"<p><p>Cardiac Resynchronization Therapy (CRT) is an established pacing therapy for heart failure patients. The New York Heart Association (NYHA) classification is often used as a measure of a patient's response to CRT. Identifying NYHA class for heart failure patients in an electronic health record (EHR) consistently, over time, can provide better understanding of the progression of heart failure and assessment of CRT response and effectiveness. However, NYHA is rarely stored in EHR structured data such information is often documented in unstructured clinical notes. In this study, we thus investigated the use of natural language processing (NLP) methods to identify NYHA classification from clinical notes. We collected 6,174 clinical notes that were matched with hospital-specific custom NYHA class diagnosis codes. Machine-learning based methods performed similar with a rule-based method. The best machine-learning method, support vector machine with n-gram features, performed the best (93% F-measure). Further validation of the findings is required.</p>","PeriodicalId":74563,"journal":{"name":"Proceedings. IEEE International Conference on Bioinformatics and Biomedicine","volume":"2017 ","pages":"1296-1299"},"PeriodicalIF":0.0000,"publicationDate":"2017-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/BIBM.2017.8217848","citationCount":"17","resultStr":"{\"title\":\"Automatic Methods to Extract New York Heart Association Classification from Clinical Notes.\",\"authors\":\"Rui Zhang,&nbsp;Sisi Ma,&nbsp;Liesa Shanahan,&nbsp;Jessica Munroe,&nbsp;Sarah Horn,&nbsp;Stuart Speedie\",\"doi\":\"10.1109/BIBM.2017.8217848\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Cardiac Resynchronization Therapy (CRT) is an established pacing therapy for heart failure patients. The New York Heart Association (NYHA) classification is often used as a measure of a patient's response to CRT. Identifying NYHA class for heart failure patients in an electronic health record (EHR) consistently, over time, can provide better understanding of the progression of heart failure and assessment of CRT response and effectiveness. However, NYHA is rarely stored in EHR structured data such information is often documented in unstructured clinical notes. In this study, we thus investigated the use of natural language processing (NLP) methods to identify NYHA classification from clinical notes. We collected 6,174 clinical notes that were matched with hospital-specific custom NYHA class diagnosis codes. Machine-learning based methods performed similar with a rule-based method. The best machine-learning method, support vector machine with n-gram features, performed the best (93% F-measure). Further validation of the findings is required.</p>\",\"PeriodicalId\":74563,\"journal\":{\"name\":\"Proceedings. IEEE International Conference on Bioinformatics and Biomedicine\",\"volume\":\"2017 \",\"pages\":\"1296-1299\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2017-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1109/BIBM.2017.8217848\",\"citationCount\":\"17\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings. IEEE International Conference on Bioinformatics and Biomedicine\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/BIBM.2017.8217848\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2017/12/18 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings. IEEE International Conference on Bioinformatics and Biomedicine","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/BIBM.2017.8217848","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2017/12/18 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 17

摘要

心脏再同步化治疗(CRT)是一种成熟的心脏起搏治疗方法。纽约心脏协会(NYHA)的分类常被用来衡量病人对CRT的反应。随着时间的推移,在电子健康记录(EHR)中一致地确定心衰患者的NYHA等级,可以更好地了解心衰的进展,并评估CRT的反应和有效性。然而,NYHA很少存储在电子病历结构化数据中,这些信息通常记录在非结构化的临床记录中。在这项研究中,我们因此研究了使用自然语言处理(NLP)方法从临床记录中识别NYHA分类。我们收集了6174份临床记录,这些记录与医院特定的定制NYHA分类诊断代码相匹配。基于机器学习的方法与基于规则的方法相似。最好的机器学习方法,具有n-gram特征的支持向量机,表现最好(93% F-measure)。需要进一步验证这些发现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Automatic Methods to Extract New York Heart Association Classification from Clinical Notes.

Cardiac Resynchronization Therapy (CRT) is an established pacing therapy for heart failure patients. The New York Heart Association (NYHA) classification is often used as a measure of a patient's response to CRT. Identifying NYHA class for heart failure patients in an electronic health record (EHR) consistently, over time, can provide better understanding of the progression of heart failure and assessment of CRT response and effectiveness. However, NYHA is rarely stored in EHR structured data such information is often documented in unstructured clinical notes. In this study, we thus investigated the use of natural language processing (NLP) methods to identify NYHA classification from clinical notes. We collected 6,174 clinical notes that were matched with hospital-specific custom NYHA class diagnosis codes. Machine-learning based methods performed similar with a rule-based method. The best machine-learning method, support vector machine with n-gram features, performed the best (93% F-measure). Further validation of the findings is required.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信