产酯酶细菌海洋Croceicoccus marinus E4A9T全基因组序列。

Q3 Biochemistry, Genetics and Molecular Biology
Standards in Genomic Sciences Pub Date : 2017-12-21 eCollection Date: 2017-01-01 DOI:10.1186/s40793-017-0300-0
Yue-Hong Wu, Hong Cheng, Ying-Yi Huo, Lin Xu, Qian Liu, Chun-Sheng Wang, Xue-Wei Xu
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引用次数: 3

摘要

从东太平洋多金属结核区收集的深海沉积物中分离出了marinus Croceicoccus e4a9t。该菌株能够产生酯酶,酯酶广泛应用于食品、香水、化妆品、化工、农业和制药行业。本文描述了菌株E4A9的特征,包括基因组序列和注释,酯酶的存在以及生物体的代谢途径。菌株E4A9T基因组全长4,109,188 bp,其中1条染色体(3,001,363 bp)和2个较大的环状质粒(分别为761,621 bp和346,204 bp)。全基因组包含3653个编码序列、48个trna、2个16S-23S-5S rRNA基因操纵子和3个ncrna。菌株E4A9T编码10个酯酶相关基因,其中3个酯酶(E3、E6和E10)已成功克隆并在大肠杆菌Rosetta中以可溶性形式表达,揭示了其在生物技术行业的潜在应用前景。此外,基因组提供了菌株E4A9T代谢途径的线索,反映了其对环境的适应性。marinus C. E4A9T的基因组序列为今后的研究提供了基础信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Complete genome sequence of esterase-producing bacterium <i>Croceicoccus marinus</i> E4A9<sup>T</sup>.

Complete genome sequence of esterase-producing bacterium <i>Croceicoccus marinus</i> E4A9<sup>T</sup>.

Complete genome sequence of esterase-producing bacterium <i>Croceicoccus marinus</i> E4A9<sup>T</sup>.

Complete genome sequence of esterase-producing bacterium Croceicoccus marinus E4A9T.

Croceicoccus marinus E4A9Twas isolated from deep-sea sediment collected from the East Pacific polymetallic nodule area. The strain is able to produce esterase, which is widely used in the food, perfume, cosmetic, chemical, agricultural and pharmaceutical industries. Here we describe the characteristics of strain E4A9, including the genome sequence and annotation, presence of esterases, and metabolic pathways of the organism. The genome of strain E4A9T comprises 4,109,188 bp, with one chromosome (3,001,363 bp) and two large circular plasmids (761,621 bp and 346,204 bp, respectively). Complete genome contains 3653 coding sequences, 48 tRNAs, two operons of 16S-23S-5S rRNA gene and three ncRNAs. Strain E4A9T encodes 10 genes related to esterase, and three of the esterases (E3, E6 and E10) was successfully cloned and expressed in Escherichia coli Rosetta in a soluble form, revealing its potential application in biotechnological industry. Moreover, the genome provides clues of metabolic pathways of strain E4A9T, reflecting its adaptations to the ambient environment. The genome sequence of C. marinus E4A9T now provides the fundamental information for future studies.

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来源期刊
Standards in Genomic Sciences
Standards in Genomic Sciences GENETICS & HEREDITY-MICROBIOLOGY
CiteScore
1.44
自引率
0.00%
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0
审稿时长
6-12 weeks
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