Laura J. Grenville-Briggs , Sandeep K. Kushwaha , Michelle R. Cleary , Johanna Witzell , Eugene I. Savenkov , Stephen C. Whisson , Aakash Chawade , Ramesh R. Vetukuri
{"title":"欧洲山毛榉(Fagus sylvatica)产卵霉菌病原菌仙人掌疫霉(Phytophthora cactorum) LV007株基因组草图","authors":"Laura J. Grenville-Briggs , Sandeep K. Kushwaha , Michelle R. Cleary , Johanna Witzell , Eugene I. Savenkov , Stephen C. Whisson , Aakash Chawade , Ramesh R. Vetukuri","doi":"10.1016/j.gdata.2017.05.010","DOIUrl":null,"url":null,"abstract":"<div><p><em>Phytophthora cactorum</em> is a broad host range phytopathogenic oomycete. <em>P. cactorum</em> strain LV007 was isolated from a diseased European Beech (<em>Fagus sylvatica</em>) in Malmö, Sweden in 2016. The draft genome of <em>P. cactorum</em> strain LV007 is 67.81<!--> <!-->Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.</p></div>","PeriodicalId":56340,"journal":{"name":"Genomics Data","volume":"12 ","pages":"Pages 155-156"},"PeriodicalIF":0.0000,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.gdata.2017.05.010","citationCount":"14","resultStr":"{\"title\":\"Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica)\",\"authors\":\"Laura J. Grenville-Briggs , Sandeep K. Kushwaha , Michelle R. Cleary , Johanna Witzell , Eugene I. Savenkov , Stephen C. Whisson , Aakash Chawade , Ramesh R. Vetukuri\",\"doi\":\"10.1016/j.gdata.2017.05.010\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p><em>Phytophthora cactorum</em> is a broad host range phytopathogenic oomycete. <em>P. cactorum</em> strain LV007 was isolated from a diseased European Beech (<em>Fagus sylvatica</em>) in Malmö, Sweden in 2016. The draft genome of <em>P. cactorum</em> strain LV007 is 67.81<!--> <!-->Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.</p></div>\",\"PeriodicalId\":56340,\"journal\":{\"name\":\"Genomics Data\",\"volume\":\"12 \",\"pages\":\"Pages 155-156\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2017-06-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/j.gdata.2017.05.010\",\"citationCount\":\"14\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Genomics Data\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2213596017300971\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genomics Data","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2213596017300971","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica)
Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.