用于体内细胞生物学的全长斑马鱼蛋白质粒文库。

Cellular logistics Pub Date : 2017-03-01 eCollection Date: 2017-01-01 DOI:10.1080/21592799.2017.1301151
Thomas E Hall, Nick Martel, Harriet P Lo, Zherui Xiong, Robert G Parton
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引用次数: 5

摘要

斑马鱼是一种新兴的模型,用于高度复杂的中等通量实验,如遗传和化学筛选。然而,在这种情况下,整个蛋白质家族的研究往往受到诸如克隆文库等贫乏遗传资源的阻碍。在这里,我们描述了一个完整的收集76全长开放阅读框克隆斑马鱼拉布蛋白家族。小鼠基因组包含60个兔基因,人类基因组包含63个,我们发现斑马鱼的18个兔基因有2个,而在rab38的情况下,有3个旁系。相比之下,我们无法在斑马鱼中找到哺乳动物Rab2b、Rab17或Rab29的同源基因。我们通过Addgene存储库提供此资源,以促进使用该模型的细胞生物学方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A plasmid library of full-length zebrafish rab proteins for <i>in vivo</i> cell biology.

A plasmid library of full-length zebrafish rab proteins for <i>in vivo</i> cell biology.

A plasmid library of full-length zebrafish rab proteins for in vivo cell biology.

The zebrafish is an emerging model for highly sophisticated medium-throughput experiments such as genetic and chemical screens. However, studies of entire protein families within this context are often hampered by poor genetic resources such as clone libraries. Here we describe a complete collection of 76 full-length open reading frame clones for the zebrafish rab protein family. While the mouse genome contains 60 rab genes and the human genome 63, we find that 18 zebrafish rab genes have 2, and in the case of rab38, 3 paralogues. In contrast, we were unable to identify zebrafish orthologues of the mammalian Rab2b, Rab17 or Rab29. We make this resource available through the Addgene repository to facilitate cell biologic approaches using this model.

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