最优控制衍生的灵敏度增强CA-CO混合序列用于MAS固态核磁共振-在序列蛋白质骨架分配中的应用

IF 2.624
Jan Blahut , Matthias J. Brandl , Riddhiman Sarkar , Bernd Reif , Zdeněk Tošner
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引用次数: 1

摘要

我们最近引入了最优控制衍生脉冲序列,用于固体蛋白质的灵敏度增强异核相关NMR实验。在多维脉冲方案中使用横向混合脉冲(TROP)保留等效相干转移路径,可以将实验的灵敏度提高到每个间接维度的2倍以上。在这篇文章中,我们提出了基于偶极相互作用的同核CA-CO横向混合元素(homoTROP),并获得了与之前描述的异核TROP脉冲相似的增益。这两种转移元件随后在3D se-hCAcoNH和se-hCOcaNH中实现,与之前介绍的3D se-hCANH和se-hCONH实验一起,形成了一套完整的敏感性增强蛋白骨架分配实验。与在快速(60 kHz)和超快MAS (>100 kHz)下使用的基于J耦合的方法相比,同色差实验使用了大约10倍的混合时间,与J耦合相比,利用了更大的偶极耦合幅度。该实验使用鸡α -谱蛋白SH3结构域的微晶,渗透样品进行了验证,其中所有可交换位点都被质子完全反取代。我们评估了所有实验现场的效率增益,特别是观察到se-hCAcoNH和se-hCOcaNH实验产生的灵敏度增加了1.36±0.09倍,与传统的hcoCAcoNH和hCOcaNH j实验相比,至少增加了1.8倍。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Optimal control derived sensitivity-enhanced CA-CO mixing sequences for MAS solid-state NMR – Applications in sequential protein backbone assignments

Optimal control derived sensitivity-enhanced CA-CO mixing sequences for MAS solid-state NMR – Applications in sequential protein backbone assignments

We have recently introduced optimal-control derived pulse sequences for sensitivity-enhanced heteronuclear correlation NMR experiments of solid proteins. Preservation of equivalent coherence transfer pathways using transverse-mixing pulses (TROP) in multidimensional pulse schemes allows to increase the sensitivity of the experiments by more than a factor of 2 per each indirect dimension. In this article, we present homonuclear CA-CO transverse-mixing elements (homoTROP) that are based on dipolar interactions and achieve similar gains as the heteronuclear TROP pulses described previously. Both transfer elements were subsequently implemented in 3D se-hCAcoNH and se-hCOcaNH, that together with the previously introduced 3D se-hCANH and se-hCONH experiments yield a complete set of sensitivity-enhanced protein backbone assignment experiments. In contrast to the J-coupling based methods that are used at fast (60 kHz) and ultrafast MAS (>100 kHz), the homoTROP experiments employ about 10-times shorter mixing times making use of the larger magnitude of the dipolar coupling in comparison to the J couplings. The experiments are demonstrated using a microcrystalline, perdeuterated sample of the chicken alpha-spectrin SH3 domain in which all exchangeable sites are fully back-substituted with protons. We evaluated the gains in efficiency in all experiments site-specifically observing that the se-hCAcoNH and se-hCOcaNH experiments yield an increase in sensitivity by a factor of 1.36±0.09 and at least a factor of 1.8 with respect to the conventional hcoCAcoNH and hCOcaNH J-based experiments.

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