韩国队列联盟:汇集队列研究的未来。

Sangjun Lee, Kwang-Pil Ko, Jung Eun Lee, Inah Kim, Sun Ha Jee, Aesun Shin, Sun-Seog Kweon, Min-Ho Shin, Sangmin Park, Seungho Ryu, Sun Young Yang, Seung Ho Choi, Jeongseon Kim, Sang-Wook Yi, Daehee Kang, Keun-Young Yoo, Sue K Park
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引用次数: 1

摘要

目的:我们介绍了韩国队列联盟(KCC)中的队列研究,重点是在韩国建立的大规模队列研究,随访时间较长。此外,我们还提供了随访预测和样本量估计,这将是基于已建立的队列研究(包括基于人群的基因组研究)的大数据分析所必需的。方法:我们主要关注来自KCC的个体队列研究的特征。我们开发了“PROFAN”,这是一个Shiny的应用程序,用于预测随访期间,以便在汇集已建立的队列研究时达到一定数量的病例。作为例子,我们预测了5000例胃癌、2500例前列腺癌和乳腺癌以及500例非霍奇金淋巴瘤的随访期。还计算了基于1:1病例对照研究的基于测序的分析的样本量。结果:KCC包括8个个体队列研究,其中3个是基于社区的队列,5个是基于健康筛查的队列。以人群为基础的队列研究主要由韩国政府机构和研究机构组织。预计随访期至少为10年,在50万参与者的队列中达到5000例。进行测序分析的最小到最大样本量的平均值为5917-72 102。结论:我们建议在现有队列研究的标准化和协调的基础上建立一个大规模的联盟,以获得足够的统计能力和足够的样本量来分析高危人群或罕见的癌症亚型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

The Korea Cohort Consortium: The Future of Pooling Cohort Studies.

The Korea Cohort Consortium: The Future of Pooling Cohort Studies.

Objectives: We introduced the cohort studies included in the Korea Cohort Consortium (KCC), focusing on large-scale cohort studies established in Korea with a prolonged follow-up period. Moreover, we also provided projections of the follow-up and estimates of the sample size that would be necessary for big-data analyses based on pooling established cohort studies, including population-based genomic studies.

Methods: We mainly focused on the characteristics of individual cohort studies from the KCC. We developed "PROFAN", a Shiny application for projecting the follow-up period to achieve a certain number of cases when pooling established cohort studies. As examples, we projected the follow-up periods for 5000 cases of gastric cancer, 2500 cases of prostate and breast cancer, and 500 cases of non-Hodgkin lymphoma. The sample sizes for sequencing-based analyses based on a 1:1 case-control study were also calculated.

Results: The KCC consisted of 8 individual cohort studies, of which 3 were community-based and 5 were health screening-based cohorts. The population-based cohort studies were mainly organized by Korean government agencies and research institutes. The projected follow-up period was at least 10 years to achieve 5000 cases based on a cohort of 0.5 million participants. The mean of the minimum to maximum sample sizes for performing sequencing analyses was 5917-72 102.

Conclusions: We propose an approach to establish a large-scale consortium based on the standardization and harmonization of existing cohort studies to obtain adequate statistical power with a sufficient sample size to analyze high-risk groups or rare cancer subtypes.

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