基于生物信息学分析的冠状病毒病2019与肺癌的潜在联系、枢纽基因和潜在药物探索

3区 医学 Q3 Medicine
Journal of Oncology Pub Date : 2022-09-26 eCollection Date: 2022-01-01 DOI:10.1155/2022/8124673
Ye Wang, Qing Li, Jianfang Zhang, Hui Xie
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引用次数: 2

摘要

正在进行的2019冠状病毒病(COVID-19)大流行对全球公共卫生和经济产生了巨大影响。肺癌是COVID-19的高危因素之一,但肺癌和COVID-19的分子机制尚不清楚,需要进一步研究。因此,我们利用公共数据库的转录组信息,采用生物信息学方法,鉴定肺癌与COVID-19的共同通路和分子生物标志物,进一步了解两者之间的联系。本研究中的两个RNA-seq数据集- gse147507 (COVID-19)和GSE33532(肺癌)-均来自基因表达综合(GEO)数据库,并鉴定了肺癌和COVID-19患者的差异表达基因(DEGs)。我们通过基因本体(GO)功能和京都基因基因组百科全书(KEGG)途径富集分析,发现肺癌和COVID-19之间存在一些共同特征。我们还进行了tfs基因、mirnas基因和基因药物分析。共发现32个deg。利用DEGs构建蛋白相互作用(PPI)网络,筛选出10个枢纽基因。最后,确定的药物可能有助于COVID-19的治疗。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Exploration of the Potential Link, Hub Genes, and Potential Drugs for Coronavirus Disease 2019 and Lung Cancer Based on Bioinformatics Analysis.

Exploration of the Potential Link, Hub Genes, and Potential Drugs for Coronavirus Disease 2019 and Lung Cancer Based on Bioinformatics Analysis.

Exploration of the Potential Link, Hub Genes, and Potential Drugs for Coronavirus Disease 2019 and Lung Cancer Based on Bioinformatics Analysis.

Exploration of the Potential Link, Hub Genes, and Potential Drugs for Coronavirus Disease 2019 and Lung Cancer Based on Bioinformatics Analysis.

The ongoing pandemic of coronavirus disease 2019 (COVID-19) has a huge influence on global public health and the economy. Lung cancer is one of the high-risk factors of COVID-19, but the molecular mechanism of lung cancer and COVID-19 is still unclear, and further research is needed. Therefore, we used the transcriptome information of the public database and adopted bioinformatics methods to identify the common pathways and molecular biomarkers of lung cancer and COVID-19 to further understand the connection between them. The two RNA-seq data sets in this study-GSE147507 (COVID-19) and GSE33532 (lung cancer)-were both derived from the Gene Expression Omnibus (GEO) database and identified differentially expressed genes (DEGs) for lung cancer and COVID-19 patients. We conducted Gene Ontology (GO) functions and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways enrichment analysis and found some common features between lung cancer and COVID-19. We also performed TFs-gene, miRNAs-gene, and gene-drug analyses. In total, 32 DEGs were found. A protein-protein interaction (PPI) network was constructed by DEGs, and 10 hub genes were screened. Finally, the identified drugs may be helpful for COVID-19 treatment.

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来源期刊
Journal of Oncology
Journal of Oncology Medicine-Oncology
自引率
0.00%
发文量
908
审稿时长
26 weeks
期刊介绍: Journal of Oncology is a peer-reviewed, Open Access journal that publishes original research articles, review articles, and clinical studies related to breast cancer, lung cancer, gastrointestinal cancer, skin cancer, head and neck cancer, paediatric oncology, neurooncology as well as genitourinary cancer. The journal provides a multidisciplinary forum for translational and clinical oncology research in the areas of molecular pathology, genomics, diagnosis and therapy, with a specific focus on molecular targeted agents and novel immune therapies.
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