在可遗传和早发胸主动脉疾病患者中发现人类 SMAD4 基因组变异。

IF 0.5 Q4 CARDIAC & CARDIOVASCULAR SYSTEMS
Cardiogenetics Pub Date : 2021-09-01 Epub Date: 2021-08-18 DOI:10.3390/cardiogenetics11030015
Shreyas A Bhave, Dong-Chuan Guo, Stoyan Angelov, Michael J Bamshad, Deborah A Nickerson, Dianna Milewicz, Mary C Wallingford
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引用次数: 0

摘要

胸主动脉瘤(TAA)发展为急性胸主动脉夹层(TAD)是威胁生命的血管事件,与转化生长因子(TGF)β信号的改变有关。除TAA外,包括遗传性出血性毛细血管扩张症(HHT)在内的多种遗传性血管疾病也涉及TGFβ信号的改变和血管畸形。由于 TGFβ 的重要性,基因组变异数据库已针对活化素受体样激酶 1(ALK1)和内切蛋白(ENG)进行了策划。本病例报告详细介绍了 SMAD4 中与遗传性或早发性主动脉夹层相关的七个变异,并将它们与 gnomAD v2.1.1 中的致病外显子变异进行了比较。TAA 和 TAD 变体是通过对 346 例无关的遗传性胸主动脉疾病(HTAD)和 355 例早发(年龄小于 56 岁)胸主动脉夹层(ESTAD)患者的全外显子测序确定的。基因组聚合数据库(gnomAD exome v2.1.1)中的等位基因频率过滤值小于 0.05%,综合注释依赖性损耗分数(CADD)大于 20。这 7 个变异体的 REVEL 评分也较高(>0.2),表明具有致病潜力。需要进一步进行体内和体外分析,以评估这些变异如何影响与胸主动脉疾病相关的 mRNA 稳定性和 SMAD4 蛋白活性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Human <i>SMAD4</i> Genomic Variants Identified in Individuals with Heritable and Early-Onset Thoracic Aortic Disease.

Human SMAD4 Genomic Variants Identified in Individuals with Heritable and Early-Onset Thoracic Aortic Disease.

Thoracic aortic aneurysms (TAAs) that progress to acute thoracic aortic dissections (TADs) are life threatening vascular events that have been associated with altered transforming growth factor (TGF) β signaling. In addition to TAA, multiple genetic vascular disorders, including hereditary hemorrhagic telangiectasia (HHT), involve altered TGFβ signaling and vascular malformations. Due to the importance of TGFβ, genomic variant databases have been curated for activin receptor-like kinase 1 (ALK1) and endoglin (ENG). This case report details seven variants in SMAD4 that are associated with either heritable or early onset aortic dissections and compares them to pathogenic exon variants in gnomAD v2.1.1. The TAA and TAD variants were identified through whole exome sequencing of 346 unrelated heritable thoracic aortic disease (HTAD) and 355 individuals of early onset (age ≤ 56 years old) of thoracic aortic dissection (ESTAD). An allele frequency filter of less than 0.05% was applied in the Genome Aggregation Database (gnomAD exome v2.1.1) with a combined annotation dependent depletion score (CADD) greater than 20. These seven variants also have a higher REVEL score (>0.2), indicating pathogenic potential. Further in vivo and in vitro analysis is needed to evaluate how these variants affect mRNA stability and SMAD4 protein activity in association with thoracic aortic disease.

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来源期刊
Cardiogenetics
Cardiogenetics CARDIAC & CARDIOVASCULAR SYSTEMS-
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审稿时长
11 weeks
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