3D-QSAR联合方法在硅中发现和分析神经氨酸酶抑制剂的发展。

IF 0.2 4区 生物学 Q4 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Chun-Yuan Lin, Hsiao-Chieh Chi, Kuei-Chung Shih, Jiayi Zhou, Nai-Wan Hsiao, Chuan-Yi Tang
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引用次数: 0

摘要

扎那米韦和奥司他韦都是神经氨酸酶(NA)的唾液酸类似物抑制剂,是治疗甲型流感病毒的重要靶点。定量构效关系(Quantitative Structure-Activity relationship, QSAR)是将化合物(或抑制剂)的结构性质与其生物活性相关联的一种常用计算方法。该模型可以方便、快速地识别相关抑制剂,并符合蛋白质结构的结合位点相互作用特征。比较分子相似指数分析(CoMSIA)模型易于优化分子结构并描述分子量的极限范围。本研究提出了一种基于相同训练集抑制剂的组合方法,将这两种模型集成在一起,以便在药物设计过程中筛选和优化NA抑制剂候选物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Development of 3D-QSAR combination approach for discovering and analysing neuraminidase inhibitors in silico.

Zanamivir and Oseltamivir are both sialic acid analog inhibitors of Neuraminidase (NA), which is an important target in influenza A virus treatment. Quantitative Structure-Activity Relationships (QSAR) is a common computational method for correlating the structural properties of compounds (or inhibitors) with their biological activities. The pharmcophore model easily and quickly recognises related inhibitors and also fits the binding site interaction features of a protein structure. The Comparative Molecular Similarity Index Analysis (CoMSIA) model easily optimises molecular structures and describes the limit range of molecule weights. This study proposes a combination approach that integrates these two models based on the same training set inhibitors in order to screen and optimize NA inhibitor candidates during drug design.

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来源期刊
CiteScore
1.00
自引率
0.00%
发文量
0
审稿时长
>12 weeks
期刊介绍: Mining bioinformatics data is an emerging area at the intersection between bioinformatics and data mining. The objective of IJDMB is to facilitate collaboration between data mining researchers and bioinformaticians by presenting cutting edge research topics and methodologies in the area of data mining for bioinformatics. This perspective acknowledges the inter-disciplinary nature of research in data mining and bioinformatics and provides a unified forum for researchers/practitioners/students/policy makers to share the latest research and developments in this fast growing multi-disciplinary research area.
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