建立FRET模型,研究大肠杆菌乳糖渗透酶对脂质的选择性。

Q3 Biochemistry, Genetics and Molecular Biology
Molecular Membrane Biology Pub Date : 2014-06-01 Epub Date: 2014-05-15 DOI:10.3109/09687688.2014.915351
Carme Suárez-Germà, Jordi Hernández-Borrell, Manuel Prieto, Luís M S Loura
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引用次数: 8

摘要

Förster共振能量转移(FRET)是一种光物理过程,通过该过程,处于电子激发态的供体(D)分子将其激发能转移到第二种物质,即受体(a)。由于FRET效率取决于D- a分离,在存在和不存在受体的情况下测量供体荧光可以确定这一距离,因此FRET已被广泛用作“光谱尺子”。在膜中,FRET的解释更为复杂,因为一个D可能被许多A分子包围。这就是膜蛋白和脂质在双分子层中遇到的情况。本文综述了建立的跨膜蛋白乳糖渗透酶(LacY的W151/C154G)单一色氨酸突变体、大肠杆菌糖/H(+)同调体和不同芘标记磷脂之间FRET数据分析模型的应用。研究人员还研究了该系统中具有生物学意义的几个变量:LacY对不同种类磷脂的选择性、FRET建模灵敏度的增强以及蛋白质中特定氨基酸(D68C)的突变。结果表明:(1)LacY对磷脂酰乙醇胺(PE)的偏好高于磷脂酰甘油(PG);(ii) LacY对流体(L(α))相的亲和力;(iii) LacY序列中68位天冬氨酸与磷脂环境相互作用的重要性。此外,通过探索使用具有更高摩尔分数的标记磷脂的纯脂质基质来增强灵敏度,揭示了对酰基链组成的依赖。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Modeling FRET to investigate the selectivity of lactose permease of Escherichia coli for lipids.

Förster resonance energy transfer (FRET) is a photophysical process by which a donor (D) molecule in an electronic excited state transfers its excitation energy to a second species, the acceptor (A). Since FRET efficiency depends on D-A separation, the measurement of donor fluorescence in presence and absence of the acceptor allows determination of this distance, and therefore FRET has been extensively used as a "spectroscopic ruler". In membranes, interpretation of FRET is more complex, since one D may be surrounded by many A molecules. Such is the case encountered with membrane proteins and lipids in the bilayer. This paper reviews the application of a model built to analyze FRET data between a single tryptophan mutant of the transmembrane protein lactose permease (W151/C154G of LacY), the sugar/H(+) symporter from Escherichia coli, and different pyrene-labeled phospholipids. Several variables of the system with biological implication have been investigated: The selectivity of LacY for different species of phospholipids, the enhancement of the sensitivity of the FRET modeling, and the mutation of a particular aminoacid (D68C) of the protein. The results obtained support: (i) Preference of LacY for phosphatidylethanolamine (PE) over phosphatidylglycerol (PG); (ii) affinity of LacY for fluid (L(α)) phases; and (iii) importance of the aspartic acid in position 68 in the sequence of LacY regarding the interaction with the phospholipid environment. Besides, by exploring the enhancement of the sensitivity by using pure lipid matrices with higher mole fractions of labelled-phospholipid, the dependence on acyl chain composition is unveiled.

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来源期刊
Molecular Membrane Biology
Molecular Membrane Biology 生物-生化与分子生物学
CiteScore
4.80
自引率
0.00%
发文量
0
审稿时长
>12 weeks
期刊介绍: Cessation. Molecular Membrane Biology provides a forum for high quality research that serves to advance knowledge in molecular aspects of biological membrane structure and function. The journal welcomes submissions of original research papers and reviews in the following areas: • Membrane receptors and signalling • Membrane transporters, pores and channels • Synthesis and structure of membrane proteins • Membrane translocation and targeting • Lipid organisation and asymmetry • Model membranes • Membrane trafficking • Cytoskeletal and extracellular membrane interactions • Cell adhesion and intercellular interactions • Molecular dynamics and molecular modelling of membranes. • Antimicrobial peptides.
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