{"title":"SN算法:分析临床时间数据,挖掘周期模式和即将发生的预兆。","authors":"Dipankar Sengupta, Pradeep K Naik","doi":"10.1186/2043-9113-3-24","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>EHR (Electronic Health Record) system has led to development of specialized form of clinical databases which enable storage of information in temporal prospective. It has been a big challenge for mining this form of clinical data considering varied temporal points. This study proposes a conjoined solution to analyze the clinical parameters akin to a disease. We have used \"association rule mining algorithm\" to discover association rules among clinical parameters that can be augmented with the disease. Furthermore, we have proposed a new algorithm, SN algorithm, to map clinical parameters along with a disease state at various temporal points.</p><p><strong>Result: </strong>SN algorithm is based on Jacobian approach, which augurs the state of a disease 'Sn' at a given temporal point 'Tn' by mapping the derivatives with the temporal point 'T0', whose state of disease 'S0' is known. The predictive ability of the proposed algorithm is evaluated in a temporal clinical data set of brain tumor patients. We have obtained a very high prediction accuracy of ~97% for a brain tumor state 'Sn' for any temporal point 'Tn'.</p><p><strong>Conclusion: </strong>The results indicate that the methodology followed may be of good value to the diagnostic procedure, especially for analyzing temporal form of clinical data.</p>","PeriodicalId":73663,"journal":{"name":"Journal of clinical bioinformatics","volume":" ","pages":"24"},"PeriodicalIF":0.0000,"publicationDate":"2013-11-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/2043-9113-3-24","citationCount":"9","resultStr":"{\"title\":\"SN algorithm: analysis of temporal clinical data for mining periodic patterns and impending augury.\",\"authors\":\"Dipankar Sengupta, Pradeep K Naik\",\"doi\":\"10.1186/2043-9113-3-24\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>EHR (Electronic Health Record) system has led to development of specialized form of clinical databases which enable storage of information in temporal prospective. It has been a big challenge for mining this form of clinical data considering varied temporal points. This study proposes a conjoined solution to analyze the clinical parameters akin to a disease. We have used \\\"association rule mining algorithm\\\" to discover association rules among clinical parameters that can be augmented with the disease. Furthermore, we have proposed a new algorithm, SN algorithm, to map clinical parameters along with a disease state at various temporal points.</p><p><strong>Result: </strong>SN algorithm is based on Jacobian approach, which augurs the state of a disease 'Sn' at a given temporal point 'Tn' by mapping the derivatives with the temporal point 'T0', whose state of disease 'S0' is known. The predictive ability of the proposed algorithm is evaluated in a temporal clinical data set of brain tumor patients. We have obtained a very high prediction accuracy of ~97% for a brain tumor state 'Sn' for any temporal point 'Tn'.</p><p><strong>Conclusion: </strong>The results indicate that the methodology followed may be of good value to the diagnostic procedure, especially for analyzing temporal form of clinical data.</p>\",\"PeriodicalId\":73663,\"journal\":{\"name\":\"Journal of clinical bioinformatics\",\"volume\":\" \",\"pages\":\"24\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2013-11-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1186/2043-9113-3-24\",\"citationCount\":\"9\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of clinical bioinformatics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1186/2043-9113-3-24\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of clinical bioinformatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1186/2043-9113-3-24","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
SN algorithm: analysis of temporal clinical data for mining periodic patterns and impending augury.
Background: EHR (Electronic Health Record) system has led to development of specialized form of clinical databases which enable storage of information in temporal prospective. It has been a big challenge for mining this form of clinical data considering varied temporal points. This study proposes a conjoined solution to analyze the clinical parameters akin to a disease. We have used "association rule mining algorithm" to discover association rules among clinical parameters that can be augmented with the disease. Furthermore, we have proposed a new algorithm, SN algorithm, to map clinical parameters along with a disease state at various temporal points.
Result: SN algorithm is based on Jacobian approach, which augurs the state of a disease 'Sn' at a given temporal point 'Tn' by mapping the derivatives with the temporal point 'T0', whose state of disease 'S0' is known. The predictive ability of the proposed algorithm is evaluated in a temporal clinical data set of brain tumor patients. We have obtained a very high prediction accuracy of ~97% for a brain tumor state 'Sn' for any temporal point 'Tn'.
Conclusion: The results indicate that the methodology followed may be of good value to the diagnostic procedure, especially for analyzing temporal form of clinical data.