Mads Ry Vogel Jørgensen, Helle Svendsen, Mette Stokkebro Schmøkel, Jacob Overgaard, Bo Brummerstedt Iversen
{"title":"论布拉格反射的意义。","authors":"Mads Ry Vogel Jørgensen, Helle Svendsen, Mette Stokkebro Schmøkel, Jacob Overgaard, Bo Brummerstedt Iversen","doi":"10.1107/S0108767312003066","DOIUrl":null,"url":null,"abstract":"<p><p>Recently Henn & Meindl [Acta Cryst. (2010), A66, 676-684] examined the significance of Bragg diffraction data through the descriptor W = (I(1/2))/(σ(I)). In the Poisson limit for the intensity errors W equals unity, but any kind of data processing (background subtraction, integration, scaling, absorption correction, Lorentz and polarization correction etc.) introduces additional error as well as remaining systematic errors and thus the significance of processed Bragg diffraction data is expected to be below the Poisson limit (W(Bragg) < 1). Curiously, it was observed by Henn & Meindl for several data sets that W(Bragg) had values larger than one. In the present study this is shown to be an artefact due to the neglect of a data scale factor applied to the standard uncertainties, and corrected values of W(Bragg) applied to Bragg data on an absolute scale are presented, which are all smaller than unity. Furthermore, the error estimation models employed by two commonly used data-processing programs {SADABS (Bruker AXS Inc., Madison, Wisconsin, USA) and SORTAV [Blessing (1997). J. Appl. Cryst. 30, 421-426]} are examined. It is shown that the empirical error model in SADABS very significantly lowers the significance of the Bragg data and it also results in a very strange distributions of errors, as observed by Henn & Meindl. On the other hand, error estimation based on the variance of a population of abundant intensity data, as used in SORTAV, provides reasonable error estimates, which are only slightly less significant than the raw data. Given that modern area detectors make measurement of highly redundant data relatively straightforward, it is concluded that the latter is the best approach for processing of data.</p>","PeriodicalId":7400,"journal":{"name":"Acta Crystallographica Section A","volume":"68 Pt 2","pages":"301-3; discussion 304"},"PeriodicalIF":1.8000,"publicationDate":"2012-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1107/S0108767312003066","citationCount":"15","resultStr":"{\"title\":\"On the significance of Bragg reflections.\",\"authors\":\"Mads Ry Vogel Jørgensen, Helle Svendsen, Mette Stokkebro Schmøkel, Jacob Overgaard, Bo Brummerstedt Iversen\",\"doi\":\"10.1107/S0108767312003066\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Recently Henn & Meindl [Acta Cryst. (2010), A66, 676-684] examined the significance of Bragg diffraction data through the descriptor W = (I(1/2))/(σ(I)). In the Poisson limit for the intensity errors W equals unity, but any kind of data processing (background subtraction, integration, scaling, absorption correction, Lorentz and polarization correction etc.) introduces additional error as well as remaining systematic errors and thus the significance of processed Bragg diffraction data is expected to be below the Poisson limit (W(Bragg) < 1). Curiously, it was observed by Henn & Meindl for several data sets that W(Bragg) had values larger than one. In the present study this is shown to be an artefact due to the neglect of a data scale factor applied to the standard uncertainties, and corrected values of W(Bragg) applied to Bragg data on an absolute scale are presented, which are all smaller than unity. Furthermore, the error estimation models employed by two commonly used data-processing programs {SADABS (Bruker AXS Inc., Madison, Wisconsin, USA) and SORTAV [Blessing (1997). J. Appl. Cryst. 30, 421-426]} are examined. It is shown that the empirical error model in SADABS very significantly lowers the significance of the Bragg data and it also results in a very strange distributions of errors, as observed by Henn & Meindl. On the other hand, error estimation based on the variance of a population of abundant intensity data, as used in SORTAV, provides reasonable error estimates, which are only slightly less significant than the raw data. Given that modern area detectors make measurement of highly redundant data relatively straightforward, it is concluded that the latter is the best approach for processing of data.</p>\",\"PeriodicalId\":7400,\"journal\":{\"name\":\"Acta Crystallographica Section A\",\"volume\":\"68 Pt 2\",\"pages\":\"301-3; discussion 304\"},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2012-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1107/S0108767312003066\",\"citationCount\":\"15\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta Crystallographica Section A\",\"FirstCategoryId\":\"88\",\"ListUrlMain\":\"https://doi.org/10.1107/S0108767312003066\",\"RegionNum\":4,\"RegionCategory\":\"材料科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2012/2/16 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Crystallographica Section A","FirstCategoryId":"88","ListUrlMain":"https://doi.org/10.1107/S0108767312003066","RegionNum":4,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2012/2/16 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
Recently Henn & Meindl [Acta Cryst. (2010), A66, 676-684] examined the significance of Bragg diffraction data through the descriptor W = (I(1/2))/(σ(I)). In the Poisson limit for the intensity errors W equals unity, but any kind of data processing (background subtraction, integration, scaling, absorption correction, Lorentz and polarization correction etc.) introduces additional error as well as remaining systematic errors and thus the significance of processed Bragg diffraction data is expected to be below the Poisson limit (W(Bragg) < 1). Curiously, it was observed by Henn & Meindl for several data sets that W(Bragg) had values larger than one. In the present study this is shown to be an artefact due to the neglect of a data scale factor applied to the standard uncertainties, and corrected values of W(Bragg) applied to Bragg data on an absolute scale are presented, which are all smaller than unity. Furthermore, the error estimation models employed by two commonly used data-processing programs {SADABS (Bruker AXS Inc., Madison, Wisconsin, USA) and SORTAV [Blessing (1997). J. Appl. Cryst. 30, 421-426]} are examined. It is shown that the empirical error model in SADABS very significantly lowers the significance of the Bragg data and it also results in a very strange distributions of errors, as observed by Henn & Meindl. On the other hand, error estimation based on the variance of a population of abundant intensity data, as used in SORTAV, provides reasonable error estimates, which are only slightly less significant than the raw data. Given that modern area detectors make measurement of highly redundant data relatively straightforward, it is concluded that the latter is the best approach for processing of data.
期刊介绍:
Acta Crystallographica Section A: Foundations and Advances publishes articles reporting advances in the theory and practice of all areas of crystallography in the broadest sense. As well as traditional crystallography, this includes nanocrystals, metacrystals, amorphous materials, quasicrystals, synchrotron and XFEL studies, coherent scattering, diffraction imaging, time-resolved studies and the structure of strain and defects in materials.
The journal has two parts, a rapid-publication Advances section and the traditional Foundations section. Articles for the Advances section are of particularly high value and impact. They receive expedited treatment and may be highlighted by an accompanying scientific commentary article and a press release. Further details are given in the November 2013 Editorial.
The central themes of the journal are, on the one hand, experimental and theoretical studies of the properties and arrangements of atoms, ions and molecules in condensed matter, periodic, quasiperiodic or amorphous, ideal or real, and, on the other, the theoretical and experimental aspects of the various methods to determine these properties and arrangements.