[水稻转录因子OsBP-73靶基因初步筛选]

植物生理与分子生物学学报 Pub Date : 2007-10-01
Shu-Min Liu, Zong-Yang Wang, Xiu-Ling Cai
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引用次数: 0

摘要

先前的研究表明,位于水稻蜡质基因上游5'区域的一个31 bp (-840 bp至-810 bp)的DNA片段可以与水稻发育胚乳中提取的核蛋白相互作用。以这段31bp的DNA序列为诱饵,用酵母单杂交系统筛选水稻cDNA文库,分离出3组cDNA克隆。其中一种是pC73, pC73对应的水稻基因被命名为OsBP-73 (Oryza sativa binding protein)。利用基因组DNA和重组p73蛋白进行下拉实验,鉴定转录因子的靶基因。将含有OsBP-73 dna结合结构域的cDNA片段克隆到大肠杆菌BL21 (DE3)的表达载体pET28-c(+)中(图1),得到与his(6)-标签融合的蛋白p73(图2)。p73在天然条件下用Ni-NTA纯化(图3)。利用pull-down法在水稻全基因组中鉴定p73的靶基因,获得22个候选基因(图4、5和表1)。结果表明,推测的光抑制受体蛋白激酶和gamyb结合蛋白可能是OsBP-73的靶基因,提示OsBP-73可能参与光信号转导。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[Preliminary screening of target genes of rice transcription factor OsBP-73].

Previous data showed that a 31-bp (from -840 bp to -810 bp) DNA fragment located at the 5' upstream region of rice waxy gene could interact with nuclear protein extracted from developing endosperm of rice. When this 31 bp DNA sequence was used as a bait to screen a rice cDNA library with a yeast one-hybrid system, three groups of cDNA clones were isolated. One of them is pC73, the correspondent rice gene of pC73 was named as OsBP-73 (Oryza sativa binding protein). A pull-down assay was made to identify the target genes of transcription factor by using genomic DNA and recombinant p73 protein. The cDNA fragment containing DNA-binding domain of OsBP-73 was cloned into expression vector pET28-c(+) (Fig.1) to produce protein p73, fused with a his(6)-tag, from E. coli BL21 (DE3) (Fig.2). The p73 was purified with Ni-NTA under native condition (Fig.3). The target genes of p73 were identified in rice genome-wide by using a pull-down assay, and 22 candidate genes were obtained (Figs.4 and 5, and Table 1). The obtained results show that putative light-repressible receptor protein kinase and GAMYB-binding protein could serve as targets of the OsBP-73, suggesting that OsBP-73 might be involved in light signal transduction.

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