Vanessa Susan Pinheiro Figliuolo, Alex Matheus Viana Ferreira, Erika Milena Corrêa Guimarães, José Francisco de Sousa E Souza, Eliana Feldberg, Maria Claudia Gross
{"title":"犬齿科犬齿性状染色体末端的隐性多样性(动物物理学:性状)。","authors":"Vanessa Susan Pinheiro Figliuolo, Alex Matheus Viana Ferreira, Erika Milena Corrêa Guimarães, José Francisco de Sousa E Souza, Eliana Feldberg, Maria Claudia Gross","doi":"10.1089/zeb.2020.1973","DOIUrl":null,"url":null,"abstract":"<p><p>The chromosomes of the dogtooth characins, fish species of the family Cynodontidae, have only a relatively small amount of heterochromatin, including the terminal portion. Curiously, in the cynodontid <i>Cynodon gibbus</i>, the terminal portion is rich in repetitive DNAs, including transposable retroelements and microsatellite sequences. Given this, this study investigated the composition of the terminal portion of the chromosomes of two cynodontid species (<i>Rhaphiodon vulpinus</i> and <i>Hydrolycus armatus</i>), to compile a database for the evaluation of all three cynodontid genera, and in particular, verify the possible tendency for the accumulation of repetitive DNAs in the terminal portion of the chromosomes of <i>C. gibbus</i>, <i>H. armatus</i>, and <i>R. vulpinus.</i> The <i>Rex</i>1, <i>Rex</i>3, and <i>Rex</i>6 transposable retroelements and the (CA)<sub>15,</sub> (GA)<sub>15</sub>, (GATA)<sub>8</sub>, (GACA)<sub>8</sub>, (CAT)<sub>10</sub>, and (CAC)<sub>10</sub> microsatellite motifs are found primarily in the terminal portion of the chromosomes of the species analyzed in this study, except <i>R. vulpinus</i>, which has no evidence of the presence of <i>Rex1</i> or <i>Rex3</i> through the fluorescent <i>in situ</i> hybridization technique. The mapping of the repetitive sequences, principally the microsatellite motifs, indicates a marked tendency for the accumulation of these sequences in the terminal portions of the chromosomes, which may have played a fundamental role in the differentiation of the three species.</p>","PeriodicalId":23872,"journal":{"name":"Zebrafish","volume":"18 3","pages":"221-230"},"PeriodicalIF":1.4000,"publicationDate":"2021-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Cryptic Diversity in the Terminal Portion of the Chromosomes of the Dogtooth Characins, Family Cynodontidae (Ostariophysi: Characiformes).\",\"authors\":\"Vanessa Susan Pinheiro Figliuolo, Alex Matheus Viana Ferreira, Erika Milena Corrêa Guimarães, José Francisco de Sousa E Souza, Eliana Feldberg, Maria Claudia Gross\",\"doi\":\"10.1089/zeb.2020.1973\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The chromosomes of the dogtooth characins, fish species of the family Cynodontidae, have only a relatively small amount of heterochromatin, including the terminal portion. Curiously, in the cynodontid <i>Cynodon gibbus</i>, the terminal portion is rich in repetitive DNAs, including transposable retroelements and microsatellite sequences. Given this, this study investigated the composition of the terminal portion of the chromosomes of two cynodontid species (<i>Rhaphiodon vulpinus</i> and <i>Hydrolycus armatus</i>), to compile a database for the evaluation of all three cynodontid genera, and in particular, verify the possible tendency for the accumulation of repetitive DNAs in the terminal portion of the chromosomes of <i>C. gibbus</i>, <i>H. armatus</i>, and <i>R. vulpinus.</i> The <i>Rex</i>1, <i>Rex</i>3, and <i>Rex</i>6 transposable retroelements and the (CA)<sub>15,</sub> (GA)<sub>15</sub>, (GATA)<sub>8</sub>, (GACA)<sub>8</sub>, (CAT)<sub>10</sub>, and (CAC)<sub>10</sub> microsatellite motifs are found primarily in the terminal portion of the chromosomes of the species analyzed in this study, except <i>R. vulpinus</i>, which has no evidence of the presence of <i>Rex1</i> or <i>Rex3</i> through the fluorescent <i>in situ</i> hybridization technique. 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Cryptic Diversity in the Terminal Portion of the Chromosomes of the Dogtooth Characins, Family Cynodontidae (Ostariophysi: Characiformes).
The chromosomes of the dogtooth characins, fish species of the family Cynodontidae, have only a relatively small amount of heterochromatin, including the terminal portion. Curiously, in the cynodontid Cynodon gibbus, the terminal portion is rich in repetitive DNAs, including transposable retroelements and microsatellite sequences. Given this, this study investigated the composition of the terminal portion of the chromosomes of two cynodontid species (Rhaphiodon vulpinus and Hydrolycus armatus), to compile a database for the evaluation of all three cynodontid genera, and in particular, verify the possible tendency for the accumulation of repetitive DNAs in the terminal portion of the chromosomes of C. gibbus, H. armatus, and R. vulpinus. The Rex1, Rex3, and Rex6 transposable retroelements and the (CA)15, (GA)15, (GATA)8, (GACA)8, (CAT)10, and (CAC)10 microsatellite motifs are found primarily in the terminal portion of the chromosomes of the species analyzed in this study, except R. vulpinus, which has no evidence of the presence of Rex1 or Rex3 through the fluorescent in situ hybridization technique. The mapping of the repetitive sequences, principally the microsatellite motifs, indicates a marked tendency for the accumulation of these sequences in the terminal portions of the chromosomes, which may have played a fundamental role in the differentiation of the three species.
期刊介绍:
Zebrafish is the only peer-reviewed journal dedicated to the central role of zebrafish and other aquarium species as models for the study of vertebrate development, evolution, toxicology, and human disease.
Due to its prolific reproduction and the external development of the transparent embryo, the zebrafish is a prime model for genetic and developmental studies. While genetically more distant from humans, the vertebrate zebrafish nevertheless has comparable organs and tissues, such as heart, kidney, pancreas, bones, and cartilage.
Zebrafish introduced the new section TechnoFish, which highlights these innovations for the general zebrafish community.
TechnoFish features two types of articles:
TechnoFish Previews: Important, generally useful technical advances or valuable transgenic lines
TechnoFish Methods: Brief descriptions of new methods, reagents, or transgenic lines that will be of widespread use in the zebrafish community
Zebrafish coverage includes:
Comparative genomics and evolution
Molecular/cellular mechanisms of cell growth
Genetic analysis of embryogenesis and disease
Toxicological and infectious disease models
Models for neurological disorders and aging
New methods, tools, and experimental approaches
Zebrafish also includes research with other aquarium species such as medaka, Fugu, and Xiphophorus.