{"title":"[niculans曲霉基因组中可变数串联重复序列的频率和分布]。","authors":"Cheng-Yun Li, Jin-Bin Li, Xiao-Gang Zhou, Shao-Song Zhang, Ming-Hui Xu","doi":"","DOIUrl":null,"url":null,"abstract":"<p><p>A total of 30.1 Mb of publicly available DNA sequence in Aspergillus niculans was researched for mono- to hexanucleotide variable-number tandem repeat (VNTR) to determine its type, size and frequency. A total of 4 837 VNTRs were observed in whole genomic DNA sequence with criteria of VNTR length > 15 bp and 80% matches. Considering all six classes of VNTRs, they occur on average about once every 6.2 kb for mono- to hexanucleotide in genomic DNA. The most abundance variable-number tandem repeat is pentanucleotide repeats; the number was 1 386, followed by hexanucleotide and trinucleotide repeats, the number was 1 228 and 1 199 respectively. The least abundance is dinucleotide repeat, only 144 tracts.</p>","PeriodicalId":23770,"journal":{"name":"Yi chuan xue bao = Acta genetica Sinica","volume":"32 5","pages":"538-44"},"PeriodicalIF":0.0000,"publicationDate":"2005-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"[Frequency and distribution of variable-number tandem repeats in the genome of Aspergillus niculans].\",\"authors\":\"Cheng-Yun Li, Jin-Bin Li, Xiao-Gang Zhou, Shao-Song Zhang, Ming-Hui Xu\",\"doi\":\"\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A total of 30.1 Mb of publicly available DNA sequence in Aspergillus niculans was researched for mono- to hexanucleotide variable-number tandem repeat (VNTR) to determine its type, size and frequency. A total of 4 837 VNTRs were observed in whole genomic DNA sequence with criteria of VNTR length > 15 bp and 80% matches. Considering all six classes of VNTRs, they occur on average about once every 6.2 kb for mono- to hexanucleotide in genomic DNA. The most abundance variable-number tandem repeat is pentanucleotide repeats; the number was 1 386, followed by hexanucleotide and trinucleotide repeats, the number was 1 228 and 1 199 respectively. The least abundance is dinucleotide repeat, only 144 tracts.</p>\",\"PeriodicalId\":23770,\"journal\":{\"name\":\"Yi chuan xue bao = Acta genetica Sinica\",\"volume\":\"32 5\",\"pages\":\"538-44\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2005-05-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Yi chuan xue bao = Acta genetica Sinica\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Yi chuan xue bao = Acta genetica Sinica","FirstCategoryId":"1085","ListUrlMain":"","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
[Frequency and distribution of variable-number tandem repeats in the genome of Aspergillus niculans].
A total of 30.1 Mb of publicly available DNA sequence in Aspergillus niculans was researched for mono- to hexanucleotide variable-number tandem repeat (VNTR) to determine its type, size and frequency. A total of 4 837 VNTRs were observed in whole genomic DNA sequence with criteria of VNTR length > 15 bp and 80% matches. Considering all six classes of VNTRs, they occur on average about once every 6.2 kb for mono- to hexanucleotide in genomic DNA. The most abundance variable-number tandem repeat is pentanucleotide repeats; the number was 1 386, followed by hexanucleotide and trinucleotide repeats, the number was 1 228 and 1 199 respectively. The least abundance is dinucleotide repeat, only 144 tracts.
求助内容：
应助结果提醒方式：
京公网安备 11010802042870号
