[一种独特的氨基酸替代方案被进化为多样性的产生,在高变的位置(作者的翻译)]。

Annales d'immunologie Pub Date : 1980-11-01
J J Bourgarit
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引用次数: 0

摘要

当比较几个排列的多肽序列时,在同一位置的氨基酸残基的多样性可以翻译如下。一个给定的氨基酸a被另一个氨基酸B平均取代的过程,其特征是与a -B对相连的系数。因此,一个给定的氨基酸被赋予19个系数的“集合”,并且这20个不同的这样的集合可以被分析。该方法适用于免疫球蛋白重链和轻链可变区VH和VL在不同序列间的多样性分析。从观察这些不同的集合的变化,根据它们的位置样本,可以得出以下结论。A)在第一个近似中,无论哪种样品,所有氨基酸都表现出相同的行为。氨基酸A被另一种氨基酸B取代的频率主要是B在样品中所占比例的函数。B)在第二种近似中,一个更复杂的替代方案是显而易见的,并且与遗传密码中的等效方案相关联;结果表明,VH和VL中的超变位置和随机位置都服从该格式。C)在第三种近似中,观察到一种互补结构,它只适用于超变位置的样本,并且可能构成选择过程的一个特殊方面:这种互补结构与遗传密码相当不同。这一分析为多样性的产生带来了对躯体理论的有力反驳。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[A distinctive scheme of amino acid replacement was evolved for the generation of diversity, among hypervariable positions (author's transl)].

The diversity of amino acid residues, at a same position when comparing several aligned polypeptide sequences, may be translated as follows. The way along which a given amino acid, A, is replaced--in average--by another amino acid, B, is characterized by a coefficient linked with the pair A-B. Thus, one given amino acid is given a "set" of 19 coefficients, and the 20 different such sets may be analyzed. This method applies to the analysis of the diversity, among different sequences VH and VL of the variable regions of immunoglobulin heavy chains and light chains. From an observation of the alterations of those different sets, according to the sample of positions from which they were derived, it is possible to reach to the following conclusions. A) In the first approximation, all the amino acids present the same behaviour, whichever the sample. The frequency of replacement of an amino acid, A, by another amino acid B, is mainly a function of the proportion of B in the sample. B) In the second approximation, a more elaborate scheme of replacement is apparent, and is linked with an equivalent scheme in the genetic code; it is shown that hypervariable positions as well as random positions in VH and VL obey to this scheme. C) In the third approximation, a complementary structure is observed, which only pertains to the sample of hypervariable positions, and which might constitute a peculiar aspect of a selective process: this complementary structure is quite diverging from the genetic code. This analysis brings a strong argument against somatic theories, for the generation of diversity.

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