使用间接方法和机器学习算法估计参考区间,以皮质醇测量为例。

IF 3.7 2区 医学 Q1 MEDICAL LABORATORY TECHNOLOGY
Fatma Demet Arslan, Georg Hoffmann
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引用次数: 0

摘要

目的:本研究旨在利用间接方法和机器学习方法,考虑年龄和采血时间的影响,确定成人总皮质醇(TC)的可靠参考区间(RIs)。方法:选取首次门诊患者上午08:00 - 10:00采集的血清TC结果。采用罗氏Elecsys皮质醇II试剂盒测定血清TC。在R包(refineR和reflimR)的支持下,通过间接方法估计的RIs用于实现机器学习算法(mclust和rpart)与制造商的参考区间(RI)(48-195 μg/L)进行比较。结果:refineR和reflimR估计的RIs(分别为57-256 μg/L和62-271 μg/L)比制造商的RI宽。refineR给出的lambda值为0.284,将reflimR应用于box - cox变换后的数据,得到的RI值为57-251 μg/L,与refineR得到的结果相似。使用与mclust的高斯混合建模实现了与制造商的RI更好的匹配,这表明四分之一的集群的RI为55.8-187 μg/L。用rpart对数据进行聚类,分层分为2个年龄组(≤35岁和bb0 ~ 35岁)和3个采血期(08:00-08:45、08:45-09:35和09:35-10:00)。TC浓度在清晨(8:00-08:45)和青壮年(18-35岁)最高。结论:本研究强调了在临床解释中同时考虑年龄和采血时间的必要性,并证明了间接方法和机器学习方法在验证已知异质性的激素RIs方面的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Use of indirect methods and machine learning algorithms for the estimation of reference intervals, taking cortisol measurements as an example.

Objectives: This study aims to determine reliable reference intervals (RIs) for total cortisol (TC) in adults considering the effects of both age and blood collection time, using indirect methods and machine learning approaches.

Methods: Serum TC results from blood samples collected between 08:00 and 10:00 am at the first outpatient visit were included in the study. Serum TC were measured using a Roche Elecsys Cortisol II kit. Estimated RIs by indirect methods with the support of R packages (refineR and reflimR) for the implementation of machine learning algorithms (mclust and rpart) were compared with the manufacturer's reference interval (RI) (48-195 μg/L).

Results: Estimated RIs by refineR and reflimR (57-256 μg/L and 62-271 μg/L, respectively) were wider than the manufacturer's RI. When reflimR was applied to Box-Cox-transformed data with the lambda value of 0.284 suggested by refineR, an RI of 57-251 μg/L was obtained, which was like that obtained with refineR. An even better match with the manufacturer's RI was achieved using Gaussian mixture modelling with the mclust, which suggested one out of four clusters with an RI of 55.8-187 μg/L. Clustering the data with rpart suggested stratification into two age groups (≤35 and >35 years) and three blood collection periods (08:00-08:45, 08:45-09:35, and 09:35-10:00). The TC levels demonstrated the highest concentrations in the early morning (8:00-08:45) and in young adults (18-35 years).

Conclusions: This study highlights the necessity of considering both age and blood collection time in clinical interpretation and demonstrates the effectiveness of indirect methods and machine learning approaches in the verification of RIs for hormones with known heterogeneity.

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来源期刊
Clinical chemistry and laboratory medicine
Clinical chemistry and laboratory medicine 医学-医学实验技术
CiteScore
11.30
自引率
16.20%
发文量
306
审稿时长
3 months
期刊介绍: Clinical Chemistry and Laboratory Medicine (CCLM) publishes articles on novel teaching and training methods applicable to laboratory medicine. CCLM welcomes contributions on the progress in fundamental and applied research and cutting-edge clinical laboratory medicine. It is one of the leading journals in the field, with an impact factor over 3. CCLM is issued monthly, and it is published in print and electronically. CCLM is the official journal of the European Federation of Clinical Chemistry and Laboratory Medicine (EFLM) and publishes regularly EFLM recommendations and news. CCLM is the official journal of the National Societies from Austria (ÖGLMKC); Belgium (RBSLM); Germany (DGKL); Hungary (MLDT); Ireland (ACBI); Italy (SIBioC); Portugal (SPML); and Slovenia (SZKK); and it is affiliated to AACB (Australia) and SFBC (France). Topics: - clinical biochemistry - clinical genomics and molecular biology - clinical haematology and coagulation - clinical immunology and autoimmunity - clinical microbiology - drug monitoring and analysis - evaluation of diagnostic biomarkers - disease-oriented topics (cardiovascular disease, cancer diagnostics, diabetes) - new reagents, instrumentation and technologies - new methodologies - reference materials and methods - reference values and decision limits - quality and safety in laboratory medicine - translational laboratory medicine - clinical metrology Follow @cclm_degruyter on Twitter!
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