苯胺衍生物希夫碱的体外抗氧化(分光光度/电化学)和酶活性:实验和计算评价。

IF 3.1 4区 生物学 Q2 BIOLOGY
Zakia Messasma , Djouhra Aggoun , Mostefa Hani , Leila Ailane , Nada Hiba Boukoucha , Chawki Bensouici , Yasmina Ouennoughi
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引用次数: 0

摘要

因此,研究了H2L配体的体外生物学、电化学、计算、分子对接和硅ADMET性质。用光谱化学和电化学方法对其抗氧化能力进行了评价。H2L在DPPH、ABTS、GOR、PRAC、还原功率、CUPRAC、菲罗啉和纳米银(SNPs)的光学性质等多种体外测试中都表现出了令人感兴趣的抗氧化能力。H2L对电化学生成的超氧阴离子自由基(O2·-)表现出清除能力。此外,H2L对某些酶的抑制活性(胆碱酯酶、酪氨酸酶、脲酶和α-淀粉酶)进行了测试,结果表明H2L对这些选定的酶有较高的抑制作用。采用密度泛函(DFT)方法(气相/B3LYP泛函与6-31G (d,p)基相关)进行了热力学行为、稳定性和反应性预测的理论研究。然后,使用AutoDock和MG-tools程序对PDB id相同的蛋白进行对接研究,分别为4EY7、4BDS、2Y9X、3LA4和2QV4,以可视化最佳对接姿态和有利的配体-蛋白结合相互作用。结果表明H2L比曲酸具有更强的酪氨酸酶抑制活性。因此,这些结果与酶抑制试验得到的实验数据吻合良好。最后,通过计算机ADMET分析检查了几个重要的物理化学描述符,并通过体外PAMPA-BBB通透性试验进行了处理。最后,根据响应面法(response surface methodology, RSM)得到的结果,确定最佳的抗氧化组合,并进行了优化分析。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In vitro antioxidant (spectrophotometric/electrochemical) and enzymatic activities of aniline derivative Schiff base: Experimental and computational assessment
Hereby, the in vitro biological, electrochemical, computational, molecular docking, and in silico ADMET properties of the H2L ligand have been investigated. The antioxidant potential was evaluated using spectrochemical as well as electrochemical assays. H2L was found to exhibit intriguing antioxidant capacities in almost several in vitro applications of tests such as DPPH, ABTS, GOR, PRAC, reducing power, CUPRAC, phenanthroline, and the optical properties of silver nanoparticles (SNPs). The H2L showed scavenging ability against electrochemically generated superoxide anion radical (O2·−) by electrochemical reduction of O2 quantitated in terms of I %. Furthermore, H2L was tested for some enzymatic inhibition activities (cholinesterase, tyrosinase, urease, and α-amylase), displaying higher inhibition toward these selected enzymes. A theoretical study was carried out by the density functional (DFT) method (gas phase/B3LYP functional associated with the 6–31G (d,p) basis) for thermodynamic behavior, stability, and reactivity prediction. Then, a docking study was performed using AutoDock and MG-tools programs with the same selected proteins with PDB IDs as follows: 4EY7, 4BDS, 2Y9X, 3LA4, and 2QV4, respectively, to visualize the best docked pose and favorable ligand-protein binding interactions. The in silico results revealed that H2L exhibited stronger tyrosinase inhibitory activity than kojic acid. Thus, these results showed good agreement with the experimental data obtained from the enzyme-inhibiting assay. Finally, several important physicochemical descriptors were examined through in silico ADMET analysis and additionally processed through in vitro PAMPA-BBB permeability assay. Finally, to identify the optimal combinations with the antioxidant responses and based on the results obtained from the response surface methodology (RSM), optimization analyses were also carried out.
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来源期刊
Computational Biology and Chemistry
Computational Biology and Chemistry 生物-计算机:跨学科应用
CiteScore
6.10
自引率
3.20%
发文量
142
审稿时长
24 days
期刊介绍: Computational Biology and Chemistry publishes original research papers and review articles in all areas of computational life sciences. High quality research contributions with a major computational component in the areas of nucleic acid and protein sequence research, molecular evolution, molecular genetics (functional genomics and proteomics), theory and practice of either biology-specific or chemical-biology-specific modeling, and structural biology of nucleic acids and proteins are particularly welcome. Exceptionally high quality research work in bioinformatics, systems biology, ecology, computational pharmacology, metabolism, biomedical engineering, epidemiology, and statistical genetics will also be considered. Given their inherent uncertainty, protein modeling and molecular docking studies should be thoroughly validated. In the absence of experimental results for validation, the use of molecular dynamics simulations along with detailed free energy calculations, for example, should be used as complementary techniques to support the major conclusions. Submissions of premature modeling exercises without additional biological insights will not be considered. Review articles will generally be commissioned by the editors and should not be submitted to the journal without explicit invitation. However prospective authors are welcome to send a brief (one to three pages) synopsis, which will be evaluated by the editors.
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