{"title":"神经紧张素和溶菌酶在黄金上软着陆的分子动力学:分子弹丸速度、入射角和温度的影响。","authors":"Samuel Bertolini, Arnaud Delcorte","doi":"10.1021/jasms.5c00174","DOIUrl":null,"url":null,"abstract":"<p><p>Employing large argon cluster ion beams, the iBEAM technique has exhibited aptitude in transferring large intact biomolecules from a target to a collector surface in the vacuum, e.g., lysozyme and glucose oxidase, while preserving their bioactivity. Our molecular dynamics (MD) simulations described the desorption of intact lysozymes, glucose oxidase, and even lysozyme clusters comprising up to five units, thereby suggesting the potential soft desorption of heavy biomolecules and their molecular clusters. In turn, assuming their soft desorption, the present contribution models the landing of a single neurotensin cluster containing 5 neurotensin molecules or one lysozyme molecule onto a gold substrate using reactive MD. The parameter space, including incidence angle, collision velocity, and cluster/protein temperature, is systematically explored. Our simulations show that fragmentation increases with the rise of the velocity, collision angle toward the normal, and temperature. Also, after the collision, the backscattering phenomenon is predominantly influenced by varying the collision velocity but is less affected by the collision angle and temperature. Nonetheless, all molecular projectile parameters play a role in shaping the landing process on gold.</p>","PeriodicalId":672,"journal":{"name":"Journal of the American Society for Mass Spectrometry","volume":" ","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2025-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Molecular Dynamics of Neurotensin and Lysozyme Soft-Landing on Gold: Influence of the Molecular Projectile Velocity, Incidence Angle and Temperature.\",\"authors\":\"Samuel Bertolini, Arnaud Delcorte\",\"doi\":\"10.1021/jasms.5c00174\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Employing large argon cluster ion beams, the iBEAM technique has exhibited aptitude in transferring large intact biomolecules from a target to a collector surface in the vacuum, e.g., lysozyme and glucose oxidase, while preserving their bioactivity. Our molecular dynamics (MD) simulations described the desorption of intact lysozymes, glucose oxidase, and even lysozyme clusters comprising up to five units, thereby suggesting the potential soft desorption of heavy biomolecules and their molecular clusters. In turn, assuming their soft desorption, the present contribution models the landing of a single neurotensin cluster containing 5 neurotensin molecules or one lysozyme molecule onto a gold substrate using reactive MD. The parameter space, including incidence angle, collision velocity, and cluster/protein temperature, is systematically explored. Our simulations show that fragmentation increases with the rise of the velocity, collision angle toward the normal, and temperature. Also, after the collision, the backscattering phenomenon is predominantly influenced by varying the collision velocity but is less affected by the collision angle and temperature. Nonetheless, all molecular projectile parameters play a role in shaping the landing process on gold.</p>\",\"PeriodicalId\":672,\"journal\":{\"name\":\"Journal of the American Society for Mass Spectrometry\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-10-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of the American Society for Mass Spectrometry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1021/jasms.5c00174\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of the American Society for Mass Spectrometry","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1021/jasms.5c00174","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Molecular Dynamics of Neurotensin and Lysozyme Soft-Landing on Gold: Influence of the Molecular Projectile Velocity, Incidence Angle and Temperature.
Employing large argon cluster ion beams, the iBEAM technique has exhibited aptitude in transferring large intact biomolecules from a target to a collector surface in the vacuum, e.g., lysozyme and glucose oxidase, while preserving their bioactivity. Our molecular dynamics (MD) simulations described the desorption of intact lysozymes, glucose oxidase, and even lysozyme clusters comprising up to five units, thereby suggesting the potential soft desorption of heavy biomolecules and their molecular clusters. In turn, assuming their soft desorption, the present contribution models the landing of a single neurotensin cluster containing 5 neurotensin molecules or one lysozyme molecule onto a gold substrate using reactive MD. The parameter space, including incidence angle, collision velocity, and cluster/protein temperature, is systematically explored. Our simulations show that fragmentation increases with the rise of the velocity, collision angle toward the normal, and temperature. Also, after the collision, the backscattering phenomenon is predominantly influenced by varying the collision velocity but is less affected by the collision angle and temperature. Nonetheless, all molecular projectile parameters play a role in shaping the landing process on gold.
期刊介绍:
The Journal of the American Society for Mass Spectrometry presents research papers covering all aspects of mass spectrometry, incorporating coverage of fields of scientific inquiry in which mass spectrometry can play a role.
Comprehensive in scope, the journal publishes papers on both fundamentals and applications of mass spectrometry. Fundamental subjects include instrumentation principles, design, and demonstration, structures and chemical properties of gas-phase ions, studies of thermodynamic properties, ion spectroscopy, chemical kinetics, mechanisms of ionization, theories of ion fragmentation, cluster ions, and potential energy surfaces. In addition to full papers, the journal offers Communications, Application Notes, and Accounts and Perspectives