先验增强属性嵌入预测SNSCC患者放化疗敏感性

IF 4.9 2区 医学 Q1 ENGINEERING, BIOMEDICAL
Zhihan Zuo , Huatao Quan , Li Yan , Yuchun Fang
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引用次数: 0

摘要

术前放化疗对鼻窦肿瘤的器官保存有很好的作用,但部分患者放化疗不敏感。由于鼻窦鳞状细胞癌(SNSCC)的样本不足且不平衡,建立一个良好的敏感性预测模型是一个挑战。针对这一问题,本文提出了基于属性嵌入(Attribute Embedding, PEAE)的端到端先验增强框架来预测SNSCC患者对放化疗的敏感性。整个预测任务分为图像智能任务和主题智能任务。PEAE应用于逐像任务,可以充分挖掘现有数据中的先验成像和非成像信息,并且可以轻松嵌入主流骨干网进行端到端优化。具体来说,我们提出了一种多级属性结构来表达图像的先验信息,该结构由一般属性、空间属性和文本属性组成。在预测过程中,利用图卷积网络建立图像之间的关系,根据多层属性结构计算图像的相关性,得到邻接矩阵。在智能图像任务中,通过对智能图像任务中获得的每张图像属于每个类别的概率值进行平均,得到每个主题的预测结果。在SNSCC和另一个公共数据集ADNI-SEG上的实验结果表明,PEAE模型的性能优于传统神经网络。在几种主流网络上,准确率、AUC和召回率提高了10%以上。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Prior-enhanced attribute embedding for predicting chemoradiotherapy sensitivity in SNSCC patients
Preoperative chemoradiotherapy plays a good role in organ preservation in sinonasal tumors, but some patients are not sensitive to chemoradiotherapy. Since the samples of sinonasal squamous cell carcinoma (SNSCC) are insufficient and unbalanced, it is challenging to establish a good model for sensitivity prediction. To solve this problem, this paper proposes an end-to-end Prior Enhancement framework based on Attribute Embedding (PEAE) to predict the sensitivity of SNSCC patients to chemoradiotherapy. The whole prediction task is divided into an image-wise task and a subject-wise task. PEAE is applied to the image-wise task, which can fully mine the prior imaging and non-imaging information in the existing data and can be easily embedded into the mainstream backbone network for end-to-end optimization. Specifically, we propose a multi-level attribute structure to express the prior information of images, which consists of general, spatial, and textual attributes. Furthermore, graph convolutional network is used to establish the relationship between images during prediction, where the adjacency matrix is obtained from the correlation of images calculated according to the multi-level attribute structure. In the subject-wise task, the prediction result of each subject is obtained by averaging the probability values obtained in the image-wise task that each image belongs to each category. The experimental results on SNSCC and an additional public dataset, ADNI-SEG, show that models with PEAE perform better than traditional neural networks. The accuracy, AUC and recall are improved by more than 10% on several mainstream networks.
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来源期刊
Biomedical Signal Processing and Control
Biomedical Signal Processing and Control 工程技术-工程:生物医学
CiteScore
9.80
自引率
13.70%
发文量
822
审稿时长
4 months
期刊介绍: Biomedical Signal Processing and Control aims to provide a cross-disciplinary international forum for the interchange of information on research in the measurement and analysis of signals and images in clinical medicine and the biological sciences. Emphasis is placed on contributions dealing with the practical, applications-led research on the use of methods and devices in clinical diagnosis, patient monitoring and management. Biomedical Signal Processing and Control reflects the main areas in which these methods are being used and developed at the interface of both engineering and clinical science. The scope of the journal is defined to include relevant review papers, technical notes, short communications and letters. Tutorial papers and special issues will also be published.
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