Xu Lu , Xiaojing Huang , Chenshuo Tang , Yuan Yuan , Haoxin Peng , Miao He , Wenhua Liang , Shaopeng Liu
{"title":"基于肿瘤微环境的超图聚集对比学习网络肺癌预后预测","authors":"Xu Lu , Xiaojing Huang , Chenshuo Tang , Yuan Yuan , Haoxin Peng , Miao He , Wenhua Liang , Shaopeng Liu","doi":"10.1016/j.bspc.2025.108830","DOIUrl":null,"url":null,"abstract":"<div><div>Lung cancer remains a leading cause of cancer-related deaths globally, with non-small cell lung cancer (NSCLC) accounting for approximately 85% of cases. The tumor microenvironment (TME) plays a crucial role in lung cancer progression and treatment response. Multiplex immunofluorescence (MIF) technology provides a unique perspective for analyzing spatial relationships within the complex TME. However, existing methods for processing MIF pathological images often process each image in isolation, overlooking both intra-patient multi-image complementarity and inter-patient pathological similarities. To address these limitations, we introduce the Hypergraph Aggregation Contrastive Learning Network (HACLN), which constructs a hypergraph to jointly model intra-patient multi-image features and inter-patient pathological relationships. HACLN aggregates features from multiple MIF images per patient, decomposes them into specialized subgraphs, and integrates them to enhance feature discrimination. We validate HACLN using an immunofluorescence image dataset from the First Affiliated Hospital of Guangzhou Medical University, demonstrating its effectiveness in capturing microenvironmental features and modeling patient-to-patient similarities. Here, we show that HACLN achieves a C-index of 0.7023, outperforming existing methods, providing a new direction for future research in lung cancer prognostic prediction based on the tumor microenvironment. Code is available at: <span><span>https://github.com/sujuKyukyu/HACLN_code</span><svg><path></path></svg></span></div></div>","PeriodicalId":55362,"journal":{"name":"Biomedical Signal Processing and Control","volume":"112 ","pages":"Article 108830"},"PeriodicalIF":4.9000,"publicationDate":"2025-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Hypergraph aggregation contrastive learning network for lung cancer prognostic prediction based on tumor microenvironment\",\"authors\":\"Xu Lu , Xiaojing Huang , Chenshuo Tang , Yuan Yuan , Haoxin Peng , Miao He , Wenhua Liang , Shaopeng Liu\",\"doi\":\"10.1016/j.bspc.2025.108830\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Lung cancer remains a leading cause of cancer-related deaths globally, with non-small cell lung cancer (NSCLC) accounting for approximately 85% of cases. The tumor microenvironment (TME) plays a crucial role in lung cancer progression and treatment response. Multiplex immunofluorescence (MIF) technology provides a unique perspective for analyzing spatial relationships within the complex TME. However, existing methods for processing MIF pathological images often process each image in isolation, overlooking both intra-patient multi-image complementarity and inter-patient pathological similarities. To address these limitations, we introduce the Hypergraph Aggregation Contrastive Learning Network (HACLN), which constructs a hypergraph to jointly model intra-patient multi-image features and inter-patient pathological relationships. HACLN aggregates features from multiple MIF images per patient, decomposes them into specialized subgraphs, and integrates them to enhance feature discrimination. We validate HACLN using an immunofluorescence image dataset from the First Affiliated Hospital of Guangzhou Medical University, demonstrating its effectiveness in capturing microenvironmental features and modeling patient-to-patient similarities. Here, we show that HACLN achieves a C-index of 0.7023, outperforming existing methods, providing a new direction for future research in lung cancer prognostic prediction based on the tumor microenvironment. Code is available at: <span><span>https://github.com/sujuKyukyu/HACLN_code</span><svg><path></path></svg></span></div></div>\",\"PeriodicalId\":55362,\"journal\":{\"name\":\"Biomedical Signal Processing and Control\",\"volume\":\"112 \",\"pages\":\"Article 108830\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2025-10-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomedical Signal Processing and Control\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1746809425013412\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical Signal Processing and Control","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1746809425013412","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
Hypergraph aggregation contrastive learning network for lung cancer prognostic prediction based on tumor microenvironment
Lung cancer remains a leading cause of cancer-related deaths globally, with non-small cell lung cancer (NSCLC) accounting for approximately 85% of cases. The tumor microenvironment (TME) plays a crucial role in lung cancer progression and treatment response. Multiplex immunofluorescence (MIF) technology provides a unique perspective for analyzing spatial relationships within the complex TME. However, existing methods for processing MIF pathological images often process each image in isolation, overlooking both intra-patient multi-image complementarity and inter-patient pathological similarities. To address these limitations, we introduce the Hypergraph Aggregation Contrastive Learning Network (HACLN), which constructs a hypergraph to jointly model intra-patient multi-image features and inter-patient pathological relationships. HACLN aggregates features from multiple MIF images per patient, decomposes them into specialized subgraphs, and integrates them to enhance feature discrimination. We validate HACLN using an immunofluorescence image dataset from the First Affiliated Hospital of Guangzhou Medical University, demonstrating its effectiveness in capturing microenvironmental features and modeling patient-to-patient similarities. Here, we show that HACLN achieves a C-index of 0.7023, outperforming existing methods, providing a new direction for future research in lung cancer prognostic prediction based on the tumor microenvironment. Code is available at: https://github.com/sujuKyukyu/HACLN_code
期刊介绍:
Biomedical Signal Processing and Control aims to provide a cross-disciplinary international forum for the interchange of information on research in the measurement and analysis of signals and images in clinical medicine and the biological sciences. Emphasis is placed on contributions dealing with the practical, applications-led research on the use of methods and devices in clinical diagnosis, patient monitoring and management.
Biomedical Signal Processing and Control reflects the main areas in which these methods are being used and developed at the interface of both engineering and clinical science. The scope of the journal is defined to include relevant review papers, technical notes, short communications and letters. Tutorial papers and special issues will also be published.