Sergey A. Katsyuba, Tatiana P. Gerasimova, Aliya M. Saitova, Timur I. Burganov, Mikhail S. Shashin, Vyacheslav E. Semenov
{"title":"水溶液浓度对对氨基苯甲酸分子和超分子结构的强烈影响及其与1,2-二氢- n -(2-羟乙基)-4,6-二甲基-2-氧嘧啶(药物Xymedon)的偶联物","authors":"Sergey A. Katsyuba, Tatiana P. Gerasimova, Aliya M. Saitova, Timur I. Burganov, Mikhail S. Shashin, Vyacheslav E. Semenov","doi":"10.1016/j.molliq.2025.128643","DOIUrl":null,"url":null,"abstract":"<div><div>Combined Raman, UV–Vis and quantum chemical studies of the structural flexibility of the <em>para</em>-aminobenzoic acid (PABA), 1,2-dyhidro-N-(2-hydroxyethyl)-4,6-dimethyl-2-oxopyrimidine (Xymedon) and their conjugate in aqueous solutions revealed strong dependence of molecular and supramolecular structures of PABA and the conjugate on concentration of the solutions. Deprotonated form of PABA, i.e. PABA<sup>−</sup> anion, dominates in highly diluted solutions with c ≤ 2∙10<sup>−5</sup> M. At 2∙10<sup>−5</sup> M < c < 10<sup>−4</sup> M, PABA and PABA<sup>−</sup> are at equilibrium, which steadily shifts to full predomination of neutral species upon increase of concentration till 5∙10<sup>−4</sup> M. At c ≥ 10<sup>−2</sup> M PABA forms self-associated species, represented by head-to-head and stacked dimers. Highly diluted solutions of the PABA-Xymedon conjugate are shown to consist of separate PABA<sup>−</sup> anions and neutral Xymedon, whereas concentrated solutions contain about 70 % of mixture of neutral PABA dimers and Xymedon molecules, and about 30 % of contact ion pairs formed by PABA<sup>−</sup> anions and protonated XymedonH<sup>+</sup> cations. Protonated XymedonH<sup>+</sup> cation is shown to be less conformationally flexible than neutral Xymedon. Good agreement of the results of quantum chemical calculations with the experimental observations allowed identification of UV–Vis and Raman spectroscopic markers of all the above-mentioned structural entities.</div></div>","PeriodicalId":371,"journal":{"name":"Journal of Molecular Liquids","volume":"437 ","pages":"Article 128643"},"PeriodicalIF":5.2000,"publicationDate":"2025-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Strong impact of concentration of aqueous solutions on molecular and supramolecular structure of para-aminobenzoic acid and its conjugate with 1,2-dyhidro-N-(2-hydroxyethyl)-4,6-dimethyl-2-oxopyrimidine (drug Xymedon)\",\"authors\":\"Sergey A. Katsyuba, Tatiana P. Gerasimova, Aliya M. Saitova, Timur I. Burganov, Mikhail S. Shashin, Vyacheslav E. Semenov\",\"doi\":\"10.1016/j.molliq.2025.128643\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Combined Raman, UV–Vis and quantum chemical studies of the structural flexibility of the <em>para</em>-aminobenzoic acid (PABA), 1,2-dyhidro-N-(2-hydroxyethyl)-4,6-dimethyl-2-oxopyrimidine (Xymedon) and their conjugate in aqueous solutions revealed strong dependence of molecular and supramolecular structures of PABA and the conjugate on concentration of the solutions. Deprotonated form of PABA, i.e. PABA<sup>−</sup> anion, dominates in highly diluted solutions with c ≤ 2∙10<sup>−5</sup> M. At 2∙10<sup>−5</sup> M < c < 10<sup>−4</sup> M, PABA and PABA<sup>−</sup> are at equilibrium, which steadily shifts to full predomination of neutral species upon increase of concentration till 5∙10<sup>−4</sup> M. At c ≥ 10<sup>−2</sup> M PABA forms self-associated species, represented by head-to-head and stacked dimers. Highly diluted solutions of the PABA-Xymedon conjugate are shown to consist of separate PABA<sup>−</sup> anions and neutral Xymedon, whereas concentrated solutions contain about 70 % of mixture of neutral PABA dimers and Xymedon molecules, and about 30 % of contact ion pairs formed by PABA<sup>−</sup> anions and protonated XymedonH<sup>+</sup> cations. Protonated XymedonH<sup>+</sup> cation is shown to be less conformationally flexible than neutral Xymedon. 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引用次数: 0
摘要
对对氨基苯甲酸(PABA)、1,2-二氢- n -(2-羟乙基)-4,6-二甲基-2-氧嘧啶(Xymedon)及其共轭物在水溶液中的结构柔韧性进行了拉曼、紫外-可见和量子化学的综合研究,揭示了PABA及其共轭物的分子结构和超分子结构对溶液浓度的强烈依赖性。在c≤2∙10−5 M的高度稀释溶液中,PABA的去质子化形式,即PABA−阴离子,占主导地位。在2∙10−5 M和c <; 10−4 M时,PABA和PABA−处于平衡状态,直到5∙10−4 M时,随着浓度的增加,PABA稳定地转变为中性物质的完全优势。在c≥10−2 M时,PABA形成自相关物质,以头对头和堆叠二聚体为代表。高度稀释的PABA-Xymedon共轭物溶液由分离的PABA-阴离子和中性的Xymedon组成,而高度稀释的溶液含有约70%的中性PABA二聚体和Xymedon分子的混合物,以及约30%由PABA-阴离子和质子化XymedonH+阳离子形成的接触离子对。质子化的XymedonH+阳离子的构象柔韧性低于中性的Xymedon。量子化学计算结果与实验观察结果的良好一致性使得上述所有结构实体的紫外-可见和拉曼光谱标记得以识别。
Strong impact of concentration of aqueous solutions on molecular and supramolecular structure of para-aminobenzoic acid and its conjugate with 1,2-dyhidro-N-(2-hydroxyethyl)-4,6-dimethyl-2-oxopyrimidine (drug Xymedon)
Combined Raman, UV–Vis and quantum chemical studies of the structural flexibility of the para-aminobenzoic acid (PABA), 1,2-dyhidro-N-(2-hydroxyethyl)-4,6-dimethyl-2-oxopyrimidine (Xymedon) and their conjugate in aqueous solutions revealed strong dependence of molecular and supramolecular structures of PABA and the conjugate on concentration of the solutions. Deprotonated form of PABA, i.e. PABA− anion, dominates in highly diluted solutions with c ≤ 2∙10−5 M. At 2∙10−5 M < c < 10−4 M, PABA and PABA− are at equilibrium, which steadily shifts to full predomination of neutral species upon increase of concentration till 5∙10−4 M. At c ≥ 10−2 M PABA forms self-associated species, represented by head-to-head and stacked dimers. Highly diluted solutions of the PABA-Xymedon conjugate are shown to consist of separate PABA− anions and neutral Xymedon, whereas concentrated solutions contain about 70 % of mixture of neutral PABA dimers and Xymedon molecules, and about 30 % of contact ion pairs formed by PABA− anions and protonated XymedonH+ cations. Protonated XymedonH+ cation is shown to be less conformationally flexible than neutral Xymedon. Good agreement of the results of quantum chemical calculations with the experimental observations allowed identification of UV–Vis and Raman spectroscopic markers of all the above-mentioned structural entities.
期刊介绍:
The journal includes papers in the following areas:
– Simple organic liquids and mixtures
– Ionic liquids
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Experimental studies, computer simulations (MD or MC) and analytical theory will be considered for publication; papers just reporting experimental results that do not contribute to the understanding of the fundamentals of molecular and ionic liquids will not be accepted. Only papers of a non-routine nature and advancing the field will be considered for publication.