{"title":"深海系泊上海洋生物膜微生物群落作为环境变化的指标。","authors":"Lidita Khandeparker, Niyati Hede, Dattesh V Desai, Roshan D'Souza, Kaushal Mapari","doi":"10.1016/j.marenvres.2025.107598","DOIUrl":null,"url":null,"abstract":"<p><p>Marine biofilms developed on buoys encasing Acoustic Doppler Current Profilers (ADCPs), deployed on deep-sea moorings for current measurements, were characterized for the first time along the continental slope of the west coast (Off Okha, Goa, Kollam) and east coast (Off Vishakhapatnam - Vizag) of India at a depth of ∼150 m over three years. The biofilm community structure and functions were elucidated using next-generation sequencing. High-throughput sequencing revealed spatio-temporal variations in the biofilm communities with site-specific microbial signatures and metabolic functions. Moreover, biofilms from the Bay of Bengal were significantly different from those in the Arabian Sea. Interestingly, Kollam biofilms were characterized by photoautotrophic carbon cycling and dominated by several cyanobacterial communities and purple non-sulfur bacterium, and is the first report of such taxa in marine biofilms at a depth of 150 m. Functional predictions indicated enhanced expression of stress-related pathways in the Vizag and Goa biofilms. Additionally, biofilms from all sites actively contributed to the degradation of carbon, nitrogen, sulfur, and hydrocarbons, highlighting their importance in marine biogeochemical processes. Notably, certain biofilm-forming genera were consistently present across all 3 years at specific sites, indicating ecological resilience and serving as bioindicators of long-term biofilm dynamics. Moreover, the presence of plastic-associated genera (Amphritea, Crocinitomix, Ulvibacter, and Oleiphilus) across several sites reflects the widespread occurrence of plastics in the surrounding marine environment. Emergence of Desulfobacterota post-lockdown in Okha biofilms suggests anthropogenic influence from increased petroleum activity and their role as markers of hydrocarbon contamination. The detection of sulfur-cycling and corrosion-associated taxa (Sulfurovum, Sedimenticola, Photobacterium, Tenacibaculum) suggests a persistent risk of microbially induced corrosion (MIC), potentially compromising the durability of oceanographic instruments/installations. These findings on deep ocean biofilm-forming bacteria not only provide valuable insights into the ecological and biogeochemical capabilities of microbes but also highlight their relevance as site-specific microbial signatures of marine pollution. This research can also aid in developing effective strategies to mitigate biofouling and bio-corrosion on oceanographic instruments.</p>","PeriodicalId":18204,"journal":{"name":"Marine environmental research","volume":"212 ","pages":"107598"},"PeriodicalIF":3.2000,"publicationDate":"2025-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Marine biofilm microbial communities on deep-sea moorings as indicators of a changing environment.\",\"authors\":\"Lidita Khandeparker, Niyati Hede, Dattesh V Desai, Roshan D'Souza, Kaushal Mapari\",\"doi\":\"10.1016/j.marenvres.2025.107598\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Marine biofilms developed on buoys encasing Acoustic Doppler Current Profilers (ADCPs), deployed on deep-sea moorings for current measurements, were characterized for the first time along the continental slope of the west coast (Off Okha, Goa, Kollam) and east coast (Off Vishakhapatnam - Vizag) of India at a depth of ∼150 m over three years. The biofilm community structure and functions were elucidated using next-generation sequencing. High-throughput sequencing revealed spatio-temporal variations in the biofilm communities with site-specific microbial signatures and metabolic functions. Moreover, biofilms from the Bay of Bengal were significantly different from those in the Arabian Sea. Interestingly, Kollam biofilms were characterized by photoautotrophic carbon cycling and dominated by several cyanobacterial communities and purple non-sulfur bacterium, and is the first report of such taxa in marine biofilms at a depth of 150 m. Functional predictions indicated enhanced expression of stress-related pathways in the Vizag and Goa biofilms. Additionally, biofilms from all sites actively contributed to the degradation of carbon, nitrogen, sulfur, and hydrocarbons, highlighting their importance in marine biogeochemical processes. Notably, certain biofilm-forming genera were consistently present across all 3 years at specific sites, indicating ecological resilience and serving as bioindicators of long-term biofilm dynamics. Moreover, the presence of plastic-associated genera (Amphritea, Crocinitomix, Ulvibacter, and Oleiphilus) across several sites reflects the widespread occurrence of plastics in the surrounding marine environment. Emergence of Desulfobacterota post-lockdown in Okha biofilms suggests anthropogenic influence from increased petroleum activity and their role as markers of hydrocarbon contamination. The detection of sulfur-cycling and corrosion-associated taxa (Sulfurovum, Sedimenticola, Photobacterium, Tenacibaculum) suggests a persistent risk of microbially induced corrosion (MIC), potentially compromising the durability of oceanographic instruments/installations. These findings on deep ocean biofilm-forming bacteria not only provide valuable insights into the ecological and biogeochemical capabilities of microbes but also highlight their relevance as site-specific microbial signatures of marine pollution. This research can also aid in developing effective strategies to mitigate biofouling and bio-corrosion on oceanographic instruments.</p>\",\"PeriodicalId\":18204,\"journal\":{\"name\":\"Marine environmental research\",\"volume\":\"212 \",\"pages\":\"107598\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2025-10-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Marine environmental research\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://doi.org/10.1016/j.marenvres.2025.107598\",\"RegionNum\":3,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENVIRONMENTAL SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Marine environmental research","FirstCategoryId":"93","ListUrlMain":"https://doi.org/10.1016/j.marenvres.2025.107598","RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENVIRONMENTAL SCIENCES","Score":null,"Total":0}
Marine biofilm microbial communities on deep-sea moorings as indicators of a changing environment.
Marine biofilms developed on buoys encasing Acoustic Doppler Current Profilers (ADCPs), deployed on deep-sea moorings for current measurements, were characterized for the first time along the continental slope of the west coast (Off Okha, Goa, Kollam) and east coast (Off Vishakhapatnam - Vizag) of India at a depth of ∼150 m over three years. The biofilm community structure and functions were elucidated using next-generation sequencing. High-throughput sequencing revealed spatio-temporal variations in the biofilm communities with site-specific microbial signatures and metabolic functions. Moreover, biofilms from the Bay of Bengal were significantly different from those in the Arabian Sea. Interestingly, Kollam biofilms were characterized by photoautotrophic carbon cycling and dominated by several cyanobacterial communities and purple non-sulfur bacterium, and is the first report of such taxa in marine biofilms at a depth of 150 m. Functional predictions indicated enhanced expression of stress-related pathways in the Vizag and Goa biofilms. Additionally, biofilms from all sites actively contributed to the degradation of carbon, nitrogen, sulfur, and hydrocarbons, highlighting their importance in marine biogeochemical processes. Notably, certain biofilm-forming genera were consistently present across all 3 years at specific sites, indicating ecological resilience and serving as bioindicators of long-term biofilm dynamics. Moreover, the presence of plastic-associated genera (Amphritea, Crocinitomix, Ulvibacter, and Oleiphilus) across several sites reflects the widespread occurrence of plastics in the surrounding marine environment. Emergence of Desulfobacterota post-lockdown in Okha biofilms suggests anthropogenic influence from increased petroleum activity and their role as markers of hydrocarbon contamination. The detection of sulfur-cycling and corrosion-associated taxa (Sulfurovum, Sedimenticola, Photobacterium, Tenacibaculum) suggests a persistent risk of microbially induced corrosion (MIC), potentially compromising the durability of oceanographic instruments/installations. These findings on deep ocean biofilm-forming bacteria not only provide valuable insights into the ecological and biogeochemical capabilities of microbes but also highlight their relevance as site-specific microbial signatures of marine pollution. This research can also aid in developing effective strategies to mitigate biofouling and bio-corrosion on oceanographic instruments.
期刊介绍:
Marine Environmental Research publishes original research papers on chemical, physical, and biological interactions in the oceans and coastal waters. The journal serves as a forum for new information on biology, chemistry, and toxicology and syntheses that advance understanding of marine environmental processes.
Submission of multidisciplinary studies is encouraged. Studies that utilize experimental approaches to clarify the roles of anthropogenic and natural causes of changes in marine ecosystems are especially welcome, as are those studies that represent new developments of a theoretical or conceptual aspect of marine science. All papers published in this journal are reviewed by qualified peers prior to acceptance and publication. Examples of topics considered to be appropriate for the journal include, but are not limited to, the following:
– The extent, persistence, and consequences of change and the recovery from such change in natural marine systems
– The biochemical, physiological, and ecological consequences of contaminants to marine organisms and ecosystems
– The biogeochemistry of naturally occurring and anthropogenic substances
– Models that describe and predict the above processes
– Monitoring studies, to the extent that their results provide new information on functional processes
– Methodological papers describing improved quantitative techniques for the marine sciences.