电压敏感荧光染料激发能的量子化学预测与实验数据的桥接。

IF 2.9 2区 化学 Q3 CHEMISTRY, PHYSICAL
Patrik Bitó, Zsófia Borbála Rózsa, Zsófia Horváth, Zoltán Mucsi, Levente Cseri, Béla Fiser, Milán Szőri
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引用次数: 0

摘要

电压敏感染料(VSDs)是一种荧光分子,可以检测膜电位的变化,这使得它们在研究神经元、心肌细胞和其他可兴奋组织的电活动方面非常宝贵。它们广泛应用于神经科学和生理学,以可视化和测量细胞网络和整个组织的实时电压动态。vsd对周围环境表现出很高的敏感性,这导致了明显的溶剂化弛豫和激发时的大量Stokes位移。准确预测它们的荧光光谱需要一个先进的溶剂化模型来捕捉这些动态效应。在这项工作中,我们扩展了基于相似变换运动方程域的单双局部对自然轨道耦合簇(STEOM-DLPNO-CCSD)方法,这是一种计算垂直激发能的有效方法,用于预测vsd的荧光光谱。虽然在Hartree-Fock水平上的默认扰动溶剂化校正已被证明对某些激发态计算有效,但它无法解释电子相关效应,而电子相关效应对于准确的荧光光谱预测至关重要。为了解决这个问题,我们结合了一个基于时间依赖密度泛函理论的微扰溶剂化校正,通过更好地捕获必要的相关效应来提高方法的准确性。通过仔细选择的两种vsd (E)-3-(4-(2-(6-(二丁基氨基)萘-2-基)乙烯基)吡啶-1- -1-基)丙烷-1-磺酸盐(di-4-ANEPPS)和4-((E)-4-((E)-4-(二乙基氨基)-2-甲氧基苯基)苯基)-2-(6-(二甲基氨基)-3-(二甲基氨基)- 3h -杂原-9-基)苯磺酸盐(sRhoVR-1)的研究验证了该方法。开发的量子化学协议可以准确预测具有主要激发态的染料的荧光最大值,并且可以适应计算限制而不会大大损害精度。然而,该研究也强调了进一步改进峰强度预测的必要性,这表明显式溶剂模型或混合量子力学/分子力学(QM/MM)方法可能对未来的工作有价值。所提出的方法为设计针对特定环境和应用进行优化的vsd提供了一个强大的工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Bridging Quantum Chemical Predictions of Excitation Energies with Experimental Data for Voltage-Sensitive Fluorescent Dyes.

Voltage-sensitive dyes (VSDs) are fluorescent molecules that detect changes in the membrane potential, making them invaluable for studying electrical activity in neurons, cardiac cells, and other excitable tissues. They are widely used in neuroscience and physiology to visualize and measure real-time voltage dynamics in cellular networks and whole tissues. VSDs exhibit a high sensitivity to their surrounding environment, which leads to notable solvation relaxation and a substantial Stokes shift upon excitation. Accurate prediction of their fluorescence spectra requires an advanced solvation model that captures these dynamic effects. In this work, we extend the Similarity Transformed Equation-of-Motion Domain-Based Local Pair Natural Orbital Coupled Cluster with Singles and Doubles (STEOM-DLPNO-CCSD) method, a computationally efficient approach for vertical excitation energies, to predict fluorescence spectra for VSDs. While the default perturbative solvation correction at the Hartree-Fock level has proven effective for some excited state calculations, it fails to account for the electron correlation effects that are crucial for accurate fluorescence spectra predictions. To address this, we incorporate a time-dependent density functional theory-based perturbative solvation correction, which improves the accuracy of the methods by better capturing the necessary correlation effects. The methodology is validated through studies of two carefully selected VSDs, (E)-3-(4-(2-(6-(dibutylamino)naphthalen-2-yl)vinyl)pyridin-1-ium-1-yl)propane-1-sulfonate (di-4-ANEPPS) and 4-((E)-4-((E)-4-(diethylamino)-2-methoxystyryl)styryl)-2-(6-(dimethylamino)-3-(dimethyliminio)-3H-xanthen-9-yl)benzenesulfonate (sRhoVR-1). The developed quantum chemical protocol allows for accurate prediction of fluorescence maxima for dyes with a predominant excited state and can accommodate computational constraints without greatly compromising precision. However, the study also highlights the need for further improvements for the prediction of peak intensity, suggesting that explicit solvent models or hybrid quantum mechanics/molecular mechanics (QM/MM) approaches could be valuable for future work. The proposed method provides a powerful tool for the design of VSDs optimized for specific environments and applications.

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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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