G. Venkatesh , Khayala Mammadova , P. Vennila , J.N. Cheerlin Mishma , R. Premkumar , S. Kaya
{"title":"以柠檬汁为绿色催化剂的新型氨基酸偶联1,2,4 -三唑衍生物的绿色合成:潜在的抗增殖、抗菌、DFT计算和分子对接分析","authors":"G. Venkatesh , Khayala Mammadova , P. Vennila , J.N. Cheerlin Mishma , R. Premkumar , S. Kaya","doi":"10.1016/j.molstruc.2025.144187","DOIUrl":null,"url":null,"abstract":"<div><div>Novel triazole amino acid derivatives (BTPC, CTPC, and NTPC) were synthesized in one-pot reactions and characterized with NMR, UV-Vis, and FT-IR spectroscopy. The synthesized compound chemical structure was optimized using the Density Functional Theory (DFT) B3LYP/6-311++G(d,p) basis set. The Multiwfn program was employed for topological studies such as ELF, LOL, ALIE, RDG, and ALIE (reactive sites of non-covalent interactions). The NBO analysis reveals inter and intra-molecular bond properties. The compounds' antiproliferative activity was tested against MCF-7 and HepG2 human cancer cell lines using the MTT assay. Among the compounds evaluated, NTPC demonstrated the lowest IC<sub>50</sub> values for both MCF-7 (4.92 ± 0.78 μM) and HepG2 (6.84 ± 0.81 μM) cell lines, signifying the most cytotoxic effectiveness. The antibacterial properties of the BTPC, CTPC, and NTPC compounds were tested against <em>B. subtilis, S. aureus, E. coli</em>, and <em>P. aeruginosa</em>. NTPC demonstrated the most significant antibacterial activity, with inhibition zones of 23.9 mm against <em>S.aureus</em> and 22.1 mm against <em>B.subtilis</em>. Molecular docking studies confirmed that BTPC has a higher binding affinity for both the breast cancer-associated estrogen receptor (PDB ID: <span><span>3ERT</span><svg><path></path></svg></span>) and the liver cancer-associated EGFR kinase (PDB ID: <span><span>5UGB</span><svg><path></path></svg></span>) than the other tested compounds CTPC, NTPC, and the reference drugs fluorouracil and sorafenib.</div></div>","PeriodicalId":16414,"journal":{"name":"Journal of Molecular Structure","volume":"1351 ","pages":"Article 144187"},"PeriodicalIF":4.7000,"publicationDate":"2025-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Green synthesis of novel amino acid-coupled 1, 2, 4-triazoles derivatives using lemon juice as a green catalyst: Potential antiproliferative, antimicrobial, DFT computation and molecular docking analysis\",\"authors\":\"G. Venkatesh , Khayala Mammadova , P. Vennila , J.N. Cheerlin Mishma , R. Premkumar , S. Kaya\",\"doi\":\"10.1016/j.molstruc.2025.144187\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Novel triazole amino acid derivatives (BTPC, CTPC, and NTPC) were synthesized in one-pot reactions and characterized with NMR, UV-Vis, and FT-IR spectroscopy. The synthesized compound chemical structure was optimized using the Density Functional Theory (DFT) B3LYP/6-311++G(d,p) basis set. The Multiwfn program was employed for topological studies such as ELF, LOL, ALIE, RDG, and ALIE (reactive sites of non-covalent interactions). The NBO analysis reveals inter and intra-molecular bond properties. The compounds' antiproliferative activity was tested against MCF-7 and HepG2 human cancer cell lines using the MTT assay. Among the compounds evaluated, NTPC demonstrated the lowest IC<sub>50</sub> values for both MCF-7 (4.92 ± 0.78 μM) and HepG2 (6.84 ± 0.81 μM) cell lines, signifying the most cytotoxic effectiveness. The antibacterial properties of the BTPC, CTPC, and NTPC compounds were tested against <em>B. subtilis, S. aureus, E. coli</em>, and <em>P. aeruginosa</em>. NTPC demonstrated the most significant antibacterial activity, with inhibition zones of 23.9 mm against <em>S.aureus</em> and 22.1 mm against <em>B.subtilis</em>. Molecular docking studies confirmed that BTPC has a higher binding affinity for both the breast cancer-associated estrogen receptor (PDB ID: <span><span>3ERT</span><svg><path></path></svg></span>) and the liver cancer-associated EGFR kinase (PDB ID: <span><span>5UGB</span><svg><path></path></svg></span>) than the other tested compounds CTPC, NTPC, and the reference drugs fluorouracil and sorafenib.</div></div>\",\"PeriodicalId\":16414,\"journal\":{\"name\":\"Journal of Molecular Structure\",\"volume\":\"1351 \",\"pages\":\"Article 144187\"},\"PeriodicalIF\":4.7000,\"publicationDate\":\"2025-09-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Molecular Structure\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0022286025028339\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Structure","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022286025028339","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Green synthesis of novel amino acid-coupled 1, 2, 4-triazoles derivatives using lemon juice as a green catalyst: Potential antiproliferative, antimicrobial, DFT computation and molecular docking analysis
Novel triazole amino acid derivatives (BTPC, CTPC, and NTPC) were synthesized in one-pot reactions and characterized with NMR, UV-Vis, and FT-IR spectroscopy. The synthesized compound chemical structure was optimized using the Density Functional Theory (DFT) B3LYP/6-311++G(d,p) basis set. The Multiwfn program was employed for topological studies such as ELF, LOL, ALIE, RDG, and ALIE (reactive sites of non-covalent interactions). The NBO analysis reveals inter and intra-molecular bond properties. The compounds' antiproliferative activity was tested against MCF-7 and HepG2 human cancer cell lines using the MTT assay. Among the compounds evaluated, NTPC demonstrated the lowest IC50 values for both MCF-7 (4.92 ± 0.78 μM) and HepG2 (6.84 ± 0.81 μM) cell lines, signifying the most cytotoxic effectiveness. The antibacterial properties of the BTPC, CTPC, and NTPC compounds were tested against B. subtilis, S. aureus, E. coli, and P. aeruginosa. NTPC demonstrated the most significant antibacterial activity, with inhibition zones of 23.9 mm against S.aureus and 22.1 mm against B.subtilis. Molecular docking studies confirmed that BTPC has a higher binding affinity for both the breast cancer-associated estrogen receptor (PDB ID: 3ERT) and the liver cancer-associated EGFR kinase (PDB ID: 5UGB) than the other tested compounds CTPC, NTPC, and the reference drugs fluorouracil and sorafenib.
期刊介绍:
The Journal of Molecular Structure is dedicated to the publication of full-length articles and review papers, providing important new structural information on all types of chemical species including:
• Stable and unstable molecules in all types of environments (vapour, molecular beam, liquid, solution, liquid crystal, solid state, matrix-isolated, surface-absorbed etc.)
• Chemical intermediates
• Molecules in excited states
• Biological molecules
• Polymers.
The methods used may include any combination of spectroscopic and non-spectroscopic techniques, for example:
• Infrared spectroscopy (mid, far, near)
• Raman spectroscopy and non-linear Raman methods (CARS, etc.)
• Electronic absorption spectroscopy
• Optical rotatory dispersion and circular dichroism
• Fluorescence and phosphorescence techniques
• Electron spectroscopies (PES, XPS), EXAFS, etc.
• Microwave spectroscopy
• Electron diffraction
• NMR and ESR spectroscopies
• Mössbauer spectroscopy
• X-ray crystallography
• Charge Density Analyses
• Computational Studies (supplementing experimental methods)
We encourage publications combining theoretical and experimental approaches. The structural insights gained by the studies should be correlated with the properties, activity and/ or reactivity of the molecule under investigation and the relevance of this molecule and its implications should be discussed.