组织病理图像弱监督语义分割的病理语言-图像匹配

IF 4.9 2区 医学 Q1 ENGINEERING, BIOMEDICAL
Meidan Ding , Xuechen Li , Wenting Chen , Songhe Deng , Linlin Shen , Zhihui Lai
{"title":"组织病理图像弱监督语义分割的病理语言-图像匹配","authors":"Meidan Ding ,&nbsp;Xuechen Li ,&nbsp;Wenting Chen ,&nbsp;Songhe Deng ,&nbsp;Linlin Shen ,&nbsp;Zhihui Lai","doi":"10.1016/j.bspc.2025.108669","DOIUrl":null,"url":null,"abstract":"<div><div>Semantic segmentation of tissues is crucial in aiding clinical diagnosis by quantitatively and objectively linking morphological characteristics to clinical outcomes. More and more tissue segmentation methods rely on weakly-supervised methods due to the time-consuming and labor-intensive burden of manual pixel-level annotations. Although current weakly supervised semantic segmentation (WSSS) methods achieve significant performance by Class Activation Maps (CAM), these methods cannot perform well on histopathological images due to the homogeneous features of different tissue types. Moreover, some pathology Contrastive Language–Image Pretraining (CLIP) models have great representation capability for histopathology, but they have not been fully used to capture homogeneous features in histopathology. To solve these challenges, we propose a novel framework named PLIMSeg (Pathology Language–Image Matching for Weakly Supervised Semantic Segmentation), which aims to leverage Contrastive Language–Image Pretraining into WSSS. Specifically, PLIMSeg utilizes pathology CLIP as the feature extractor, aiming to utilize the strong representation capability of pre-trained language–image models to represent features. Then we design three losses based on pathology language–image matching (PLIM), to constrain the CAMs generated by the original image encoder. With these constraints, PLIMSeg can generate a more complete and precise pseudo mask for segmentation. Our PLIMSeg has a better performance compared with other weakly supervised segmentation methods of pathology on LUAD-HistoSeg and BCSS-WSSS datasets, setting a new state-of-the-art for WSSS of histopathology images.</div></div>","PeriodicalId":55362,"journal":{"name":"Biomedical Signal Processing and Control","volume":"112 ","pages":"Article 108669"},"PeriodicalIF":4.9000,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"PLIMSeg: Pathology language–image matching for weakly supervised semantic segmentation of histopathology images\",\"authors\":\"Meidan Ding ,&nbsp;Xuechen Li ,&nbsp;Wenting Chen ,&nbsp;Songhe Deng ,&nbsp;Linlin Shen ,&nbsp;Zhihui Lai\",\"doi\":\"10.1016/j.bspc.2025.108669\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Semantic segmentation of tissues is crucial in aiding clinical diagnosis by quantitatively and objectively linking morphological characteristics to clinical outcomes. More and more tissue segmentation methods rely on weakly-supervised methods due to the time-consuming and labor-intensive burden of manual pixel-level annotations. Although current weakly supervised semantic segmentation (WSSS) methods achieve significant performance by Class Activation Maps (CAM), these methods cannot perform well on histopathological images due to the homogeneous features of different tissue types. Moreover, some pathology Contrastive Language–Image Pretraining (CLIP) models have great representation capability for histopathology, but they have not been fully used to capture homogeneous features in histopathology. To solve these challenges, we propose a novel framework named PLIMSeg (Pathology Language–Image Matching for Weakly Supervised Semantic Segmentation), which aims to leverage Contrastive Language–Image Pretraining into WSSS. Specifically, PLIMSeg utilizes pathology CLIP as the feature extractor, aiming to utilize the strong representation capability of pre-trained language–image models to represent features. Then we design three losses based on pathology language–image matching (PLIM), to constrain the CAMs generated by the original image encoder. With these constraints, PLIMSeg can generate a more complete and precise pseudo mask for segmentation. Our PLIMSeg has a better performance compared with other weakly supervised segmentation methods of pathology on LUAD-HistoSeg and BCSS-WSSS datasets, setting a new state-of-the-art for WSSS of histopathology images.</div></div>\",\"PeriodicalId\":55362,\"journal\":{\"name\":\"Biomedical Signal Processing and Control\",\"volume\":\"112 \",\"pages\":\"Article 108669\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2025-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomedical Signal Processing and Control\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1746809425011802\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical Signal Processing and Control","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1746809425011802","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0

摘要

通过定量和客观地将形态学特征与临床结果联系起来,组织的语义分割对于帮助临床诊断至关重要。由于手工像素级标注耗时费力,越来越多的组织分割方法依赖于弱监督方法。虽然目前的弱监督语义分割(WSSS)方法在类激活图(CAM)上取得了显著的效果,但由于不同组织类型的同质性,这些方法在组织病理学图像上表现不佳。此外,一些病理对比语言图像预训练(CLIP)模型对组织病理学具有较强的表征能力,但尚未完全用于捕获组织病理学中的同质特征。为了解决这些挑战,我们提出了一个名为PLIMSeg(弱监督语义分割病理语言图像匹配)的新框架,旨在利用对比语言图像预训练到WSSS中。具体而言,PLIMSeg利用病理CLIP作为特征提取器,旨在利用预训练的语言图像模型的强表示能力来表示特征。然后,我们设计了三种基于病理语言图像匹配(PLIM)的损失,以约束原始图像编码器生成的cam。有了这些约束,PLIMSeg可以为分割生成更完整、更精确的伪掩码。我们的PLIMSeg在LUAD-HistoSeg和BCSS-WSSS数据集上比其他弱监督的病理分割方法有更好的性能,为组织病理图像的WSSS设置了新的技术水平。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
PLIMSeg: Pathology language–image matching for weakly supervised semantic segmentation of histopathology images
Semantic segmentation of tissues is crucial in aiding clinical diagnosis by quantitatively and objectively linking morphological characteristics to clinical outcomes. More and more tissue segmentation methods rely on weakly-supervised methods due to the time-consuming and labor-intensive burden of manual pixel-level annotations. Although current weakly supervised semantic segmentation (WSSS) methods achieve significant performance by Class Activation Maps (CAM), these methods cannot perform well on histopathological images due to the homogeneous features of different tissue types. Moreover, some pathology Contrastive Language–Image Pretraining (CLIP) models have great representation capability for histopathology, but they have not been fully used to capture homogeneous features in histopathology. To solve these challenges, we propose a novel framework named PLIMSeg (Pathology Language–Image Matching for Weakly Supervised Semantic Segmentation), which aims to leverage Contrastive Language–Image Pretraining into WSSS. Specifically, PLIMSeg utilizes pathology CLIP as the feature extractor, aiming to utilize the strong representation capability of pre-trained language–image models to represent features. Then we design three losses based on pathology language–image matching (PLIM), to constrain the CAMs generated by the original image encoder. With these constraints, PLIMSeg can generate a more complete and precise pseudo mask for segmentation. Our PLIMSeg has a better performance compared with other weakly supervised segmentation methods of pathology on LUAD-HistoSeg and BCSS-WSSS datasets, setting a new state-of-the-art for WSSS of histopathology images.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Biomedical Signal Processing and Control
Biomedical Signal Processing and Control 工程技术-工程:生物医学
CiteScore
9.80
自引率
13.70%
发文量
822
审稿时长
4 months
期刊介绍: Biomedical Signal Processing and Control aims to provide a cross-disciplinary international forum for the interchange of information on research in the measurement and analysis of signals and images in clinical medicine and the biological sciences. Emphasis is placed on contributions dealing with the practical, applications-led research on the use of methods and devices in clinical diagnosis, patient monitoring and management. Biomedical Signal Processing and Control reflects the main areas in which these methods are being used and developed at the interface of both engineering and clinical science. The scope of the journal is defined to include relevant review papers, technical notes, short communications and letters. Tutorial papers and special issues will also be published.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信