新型5-氟尿嘧啶杂交体胸苷酸合成酶抑制剂的设计与计算研究

IF 3.1 4区 生物学 Q2 BIOLOGY
Dishank Purandare , Prajakta Adsule , Rahul Jawarkar , Aryaa Nigade , Satish Polshettiwar
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引用次数: 0

摘要

癌症是一种多因子疾病,其特征是细胞增殖不受控制和调节机制受损,在其多种形式中,非小细胞肺癌仍然是世界上最普遍和最致命的恶性肿瘤之一。为了治疗非小细胞肺癌,科学家们非常重视能够降低细胞耐药性、提高效力或防止DNA改变的药物。最近对TS抑制剂的研究已经证明了在不良反应最小的情况下有效治疗非小细胞肺癌的潜力。因此,需要针对TS抑制剂的更先进、更有效的抗癌药物,正如开发新的抗癌药物所承诺的那样,减少或没有不良反应。我们最近研究的目的是设计和评估基于5- fu的杂交体,与已知的抑制剂(如Raltitrexed)相比,它们可以抑制TS。我们设计并对5-FU复合物进行了详细的计算研究,打算将其作为TS的可能抑制剂。在对设计的12个分子进行了各种研究后,发现化合物C04, C08, C12与标准药物(Raltitrexed)相比效果更好。不仅如此,与标准药物相比,所有设计的化合物都表现出更高的稳定性。选择化合物C04、C08和C12进行自由景观能、主成分分析、自由结合能研究和MD模拟等分子研究。对接研究利用胸腺苷酸合成酶抑制剂(PDB ID: 6ZXO)的晶体结构。此外,进行了MD模拟和QSAR研究,获得了令人满意的结果,提示了未来治疗NSCLC的潜在药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Designing and computational studies of Novel 5-Fluorouracil hybrids as thymidylate synthase inhibitors for targeting non small cell lung cancer
Cancer is a multifactorial disease characterized by uncontrolled cellular proliferation and impaired regulatory mechanisms, and among its diverse forms, NSCLC remains one of the most prevalent and lethal malignancies worldwide. To address NSCLC, scientists are placing great emphasis on drugs that can reduce cell resistance, improve potency or prevent DNA alterations. Recent studies on TS inhibitors have demonstrated the potential of effective management of NSCLC with minimal adverse reactions. Therefore, there is a demand for more advanced and efficient anti-cancer medications targeting TS inhibitors, as promised in the development of new anti-cancer drugs that have reduced or no adverse effects. The objectives of our recent study were to design and evaluate 5-FU-based hybrids that can inhibit TS in comparison to already known inhibitors such as Raltitrexed. We designed and performed a detailed computational study on 5-FU hybrids, intending to use them as possible inhibitors of TS. After performing various studies on 12 molecules designed, it was found that compounds C04, C08, and C12 presented better results when compared with the standard drug (Raltitrexed). Not only that, but all the designed compounds showed higher stability when compared to the standard drug. Compounds C04, C08 and C12 were chosen for additional screening for molecular studies like Free landscape energy, Principal component analysis, free binding energy study and MD Simulation. Docking investigation utilised the crystal structure of the thymidylate synthase inhibitor enzyme (PDB ID: 6ZXO). Further, MD simulations and QSAR Studies were performed, and satisfactory results were obtained, suggesting future potential drugs for the treatment of NSCLC.
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来源期刊
Computational Biology and Chemistry
Computational Biology and Chemistry 生物-计算机:跨学科应用
CiteScore
6.10
自引率
3.20%
发文量
142
审稿时长
24 days
期刊介绍: Computational Biology and Chemistry publishes original research papers and review articles in all areas of computational life sciences. High quality research contributions with a major computational component in the areas of nucleic acid and protein sequence research, molecular evolution, molecular genetics (functional genomics and proteomics), theory and practice of either biology-specific or chemical-biology-specific modeling, and structural biology of nucleic acids and proteins are particularly welcome. Exceptionally high quality research work in bioinformatics, systems biology, ecology, computational pharmacology, metabolism, biomedical engineering, epidemiology, and statistical genetics will also be considered. Given their inherent uncertainty, protein modeling and molecular docking studies should be thoroughly validated. In the absence of experimental results for validation, the use of molecular dynamics simulations along with detailed free energy calculations, for example, should be used as complementary techniques to support the major conclusions. Submissions of premature modeling exercises without additional biological insights will not be considered. Review articles will generally be commissioned by the editors and should not be submitted to the journal without explicit invitation. However prospective authors are welcome to send a brief (one to three pages) synopsis, which will be evaluated by the editors.
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