Preshen Naidoo , Patricia Fernandes , Nasim Dadashi Serej , Charlotte H. Manisty , Matthew J. Shun-Shin , Darrel P. Francis , Massoud Zolgharni
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The impact of dataset size and distribution on pre-training is examined, revealing that excessive unlabelled data can degrade performance due to redundancy and low variability. A novel multi-expert labelled dataset is introduced to enhance segmentation evaluation, using consensus-based annotations to reduce annotation noise and improve reliability.</div></div><div><h3>Results:</h3><div>Among the self-supervised learning methods evaluated, contrastive learning consistently outperforms other approaches, particularly in low-label settings. The study demonstrates that AI models pre-trained using self-supervised learning and fine-tuned with only 15% of labelled data achieve stronger alignment with multi-expert consensus than any individual expert.</div></div><div><h3>Conclusion:</h3><div>The findings suggest that AI models can generalise well across expert annotations, providing more reliable and reproducible assessments.</div></div>","PeriodicalId":10578,"journal":{"name":"Computers in biology and medicine","volume":"198 ","pages":"Article 111148"},"PeriodicalIF":6.3000,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Consensus-guided evaluation of self-supervised learning in echocardiographic segmentation\",\"authors\":\"Preshen Naidoo , Patricia Fernandes , Nasim Dadashi Serej , Charlotte H. Manisty , Matthew J. Shun-Shin , Darrel P. Francis , Massoud Zolgharni\",\"doi\":\"10.1016/j.compbiomed.2025.111148\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background:</h3><div>Left ventricle segmentation is a fundamental task in echocardiography, essential for assessing cardiac function. However, deep learning models for segmentation rely on large labelled datasets, which are expensive and time-consuming to annotate. Self-supervised learning has emerged as a promising approach to leverage unlabelled data, but its effectiveness for left ventricle segmentation remains underexplored.</div></div><div><h3>Methods:</h3><div>This study investigates self-supervised learning for echocardiographic segmentation, comparing various pretext tasks. The impact of dataset size and distribution on pre-training is examined, revealing that excessive unlabelled data can degrade performance due to redundancy and low variability. A novel multi-expert labelled dataset is introduced to enhance segmentation evaluation, using consensus-based annotations to reduce annotation noise and improve reliability.</div></div><div><h3>Results:</h3><div>Among the self-supervised learning methods evaluated, contrastive learning consistently outperforms other approaches, particularly in low-label settings. The study demonstrates that AI models pre-trained using self-supervised learning and fine-tuned with only 15% of labelled data achieve stronger alignment with multi-expert consensus than any individual expert.</div></div><div><h3>Conclusion:</h3><div>The findings suggest that AI models can generalise well across expert annotations, providing more reliable and reproducible assessments.</div></div>\",\"PeriodicalId\":10578,\"journal\":{\"name\":\"Computers in biology and medicine\",\"volume\":\"198 \",\"pages\":\"Article 111148\"},\"PeriodicalIF\":6.3000,\"publicationDate\":\"2025-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computers in biology and medicine\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S001048252501501X\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computers in biology and medicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S001048252501501X","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOLOGY","Score":null,"Total":0}
Consensus-guided evaluation of self-supervised learning in echocardiographic segmentation
Background:
Left ventricle segmentation is a fundamental task in echocardiography, essential for assessing cardiac function. However, deep learning models for segmentation rely on large labelled datasets, which are expensive and time-consuming to annotate. Self-supervised learning has emerged as a promising approach to leverage unlabelled data, but its effectiveness for left ventricle segmentation remains underexplored.
Methods:
This study investigates self-supervised learning for echocardiographic segmentation, comparing various pretext tasks. The impact of dataset size and distribution on pre-training is examined, revealing that excessive unlabelled data can degrade performance due to redundancy and low variability. A novel multi-expert labelled dataset is introduced to enhance segmentation evaluation, using consensus-based annotations to reduce annotation noise and improve reliability.
Results:
Among the self-supervised learning methods evaluated, contrastive learning consistently outperforms other approaches, particularly in low-label settings. The study demonstrates that AI models pre-trained using self-supervised learning and fine-tuned with only 15% of labelled data achieve stronger alignment with multi-expert consensus than any individual expert.
Conclusion:
The findings suggest that AI models can generalise well across expert annotations, providing more reliable and reproducible assessments.
期刊介绍:
Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.