Tian Xia, Rui-Tian Ma, Jia-Ying Li, Hui Liu, Hai-Bo Yi
{"title":"纳米约束和界面效应对二维纳米通道内磷酸钙聚集的影响:来自深度学习分子动力学的见解。","authors":"Tian Xia, Rui-Tian Ma, Jia-Ying Li, Hui Liu, Hai-Bo Yi","doi":"10.1021/acs.jpcb.5c04375","DOIUrl":null,"url":null,"abstract":"<p><p>In this study, we investigated the hydration and aggregation dynamics of Ca<sup>2+</sup> and phosphate species, as well as the structural characteristics of calcium phosphate clusters, within a two-dimensional (2D) nanochannel using molecular dynamics simulations with a deep learning potential. Our findings show that ion dynamics are markedly enhanced under confinement, primarily due to accelerated water dynamics. Ion hydration within the 2D nanochannel is reduced as a result of layered water distribution and frequent water exchange around ions compared to the bulk phase solution, thereby facilitating coordination between Ca<sup>2+</sup> and phosphate species despite observed polarization effects. However, an increased energy barrier for association between Ca<sup>2+</sup> and phosphate species can slow their aggregation within the 2D nanochannel. Since protonated phosphate species exhibit a stronger preference for interfacial water layers than PO<sub>4</sub><sup>3-</sup>, fewer protons are present in cluster of Ca<sup>2+</sup> and phosphate species in the bulk-like region, which facilitates the association of Ca<sup>2+</sup> and phosphate species. The interfacial enrichment of protonated species can also promote the transformation of amorphous calcium phosphate (ACP) to hydroxyapatite. Our results presented here elucidate the influence of nanoconfinement and interfacial interactions on calcium phosphate aggregation within 2D nanochannels, offering valuable insights into biological and biomimetic mineralization processes.</p>","PeriodicalId":60,"journal":{"name":"The Journal of Physical Chemistry B","volume":" ","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2025-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Nanoconfinement and Interface Effects on Calcium Phosphate Aggregation within a 2D Nanochannel: Insights from Deep-Learning Molecular Dynamics.\",\"authors\":\"Tian Xia, Rui-Tian Ma, Jia-Ying Li, Hui Liu, Hai-Bo Yi\",\"doi\":\"10.1021/acs.jpcb.5c04375\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>In this study, we investigated the hydration and aggregation dynamics of Ca<sup>2+</sup> and phosphate species, as well as the structural characteristics of calcium phosphate clusters, within a two-dimensional (2D) nanochannel using molecular dynamics simulations with a deep learning potential. Our findings show that ion dynamics are markedly enhanced under confinement, primarily due to accelerated water dynamics. Ion hydration within the 2D nanochannel is reduced as a result of layered water distribution and frequent water exchange around ions compared to the bulk phase solution, thereby facilitating coordination between Ca<sup>2+</sup> and phosphate species despite observed polarization effects. However, an increased energy barrier for association between Ca<sup>2+</sup> and phosphate species can slow their aggregation within the 2D nanochannel. Since protonated phosphate species exhibit a stronger preference for interfacial water layers than PO<sub>4</sub><sup>3-</sup>, fewer protons are present in cluster of Ca<sup>2+</sup> and phosphate species in the bulk-like region, which facilitates the association of Ca<sup>2+</sup> and phosphate species. The interfacial enrichment of protonated species can also promote the transformation of amorphous calcium phosphate (ACP) to hydroxyapatite. Our results presented here elucidate the influence of nanoconfinement and interfacial interactions on calcium phosphate aggregation within 2D nanochannels, offering valuable insights into biological and biomimetic mineralization processes.</p>\",\"PeriodicalId\":60,\"journal\":{\"name\":\"The Journal of Physical Chemistry B\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2025-09-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"The Journal of Physical Chemistry B\",\"FirstCategoryId\":\"1\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jpcb.5c04375\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Journal of Physical Chemistry B","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1021/acs.jpcb.5c04375","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Nanoconfinement and Interface Effects on Calcium Phosphate Aggregation within a 2D Nanochannel: Insights from Deep-Learning Molecular Dynamics.
In this study, we investigated the hydration and aggregation dynamics of Ca2+ and phosphate species, as well as the structural characteristics of calcium phosphate clusters, within a two-dimensional (2D) nanochannel using molecular dynamics simulations with a deep learning potential. Our findings show that ion dynamics are markedly enhanced under confinement, primarily due to accelerated water dynamics. Ion hydration within the 2D nanochannel is reduced as a result of layered water distribution and frequent water exchange around ions compared to the bulk phase solution, thereby facilitating coordination between Ca2+ and phosphate species despite observed polarization effects. However, an increased energy barrier for association between Ca2+ and phosphate species can slow their aggregation within the 2D nanochannel. Since protonated phosphate species exhibit a stronger preference for interfacial water layers than PO43-, fewer protons are present in cluster of Ca2+ and phosphate species in the bulk-like region, which facilitates the association of Ca2+ and phosphate species. The interfacial enrichment of protonated species can also promote the transformation of amorphous calcium phosphate (ACP) to hydroxyapatite. Our results presented here elucidate the influence of nanoconfinement and interfacial interactions on calcium phosphate aggregation within 2D nanochannels, offering valuable insights into biological and biomimetic mineralization processes.
期刊介绍:
An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.