基于机器学习的放射组学模型:子宫内膜癌患者预后预测及机制探讨。

IF 11.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL
Yu Zhang, Xiaoqing Bao, Yaru Wang, Linrui Li, Long Liu, Qibing Wu
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引用次数: 0

摘要

目的:探讨基于机器学习的放射组学模型对子宫内膜癌(EC)患者术后总生存期(OS)的预测价值及其生物学机制。方法:回顾性分析三个中心469例子宫内膜癌患者的资料(1中心271例,2中心154例,3中心44例),1中心90例患者的资料进行前瞻性分析。收集所有患者的T2WI原发病灶及其周围5mm区域的三维放射组学参数。采用10种机器学习方法计算最佳放射组学评分(Radscore),揭示其对现有临床指标、病理、转录组学和蛋白质组学的增量值。最终利用TCGA和CPTAC对放射组学模型的生物学机制进行探索,并进行实验验证。结果:肿瘤与肿瘤周围放射组学特征在预测EC患者预后方面具有一定的互补性。基于XGboost的联合放射组学模型预测效果最佳,auc分别为0.862、0.885、0.870(验证集),0.823、0.869、0.849(测试集1)和0.850、0.731、0.800(测试集2)。放射组学模型对现有临床指标具有较高的增量价值,可有效改善预后预测。此外,放射组学模型已被证明与病理学、转录组学和蛋白质组学具有协同预测预后的潜力。最后,机械探索表明放射组学模型可能与肿瘤血管生成相关通路有关,其中FLT1被强调。结论:基于机器学习的放射组学模型有助于预测EC患者术后OS,并提示与肿瘤血管生成相关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Machine learning-based radiomics model: prognostic prediction and mechanism exploration in patients with endometrial cancer.

Objectives: To investigate the predictive value of machine-learning-based Radiomics models for postoperative overall survival (OS) of endometrial cancer (EC) patients and their biological mechanisms.

Methods: Data from 469 patients with endometrial cancer in three Centers (271 in Center 1, 154 in Center 2, and 44 in Center 3) were retrospectively and 90 patients in Center 1 were prospectively analyzed. Three-dimensional Radiomics parameters of the primary lesion and its surrounding 5 mm region in T2WI were collected from all patients. Ten machine learning methods were used to calculate the optimal Radiomics score (Radscore), whose incremental value to the available clinical indexes, pathomics, transcriptomics, and proteomics were revealed. Eventually, TCGA and CPTAC were used for the exploration of biological mechanisms of Radiomics model, with experimental validation.

Results: Radiomics features of tumor and peritumor showed some complementarity in the prognostic prediction of EC patients. The best predictive efficacy was demonstrated by the combined Radiomics model based on XGboost, with AUCs of 0.862, 0.885, 0.870 (validation set) and 0.823, 0.869, 0.849 (test set 1) and 0.850, 0.731, 0.800 (test set 2). Radiomics models demonstrated high incremental value to existing clinical indicators and can effectively improve prognostic prediction. In addition, Radiomics models have been shown to have synergistic prognostic predictive potential with pathomics, transcriptomics, and proteomics. Finally, mechanical explorations suggest that Radiomics models may be associated with tumor angiogenesis-related pathways, of which FLT1 was highlighted.

Conclusions: Machine learning-based Radiomics model contributes to predicting postoperative OS in EC patients and suggests a correlation with tumor angiogenesis.

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来源期刊
Biomarker Research
Biomarker Research Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
15.80
自引率
1.80%
发文量
80
审稿时长
10 weeks
期刊介绍: Biomarker Research, an open-access, peer-reviewed journal, covers all aspects of biomarker investigation. It seeks to publish original discoveries, novel concepts, commentaries, and reviews across various biomedical disciplines. The field of biomarker research has progressed significantly with the rise of personalized medicine and individual health. Biomarkers play a crucial role in drug discovery and development, as well as in disease diagnosis, treatment, prognosis, and prevention, particularly in the genome era.
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