{"title":"芝麻Dof转录因子的全基因组鉴定及SiDof8、SiDof10和SiDof34在脂肪酸合成中的功能分析","authors":"Feicui Zhang, Shanyu Chen, Feiling Song, Limin Shi, Xuegao Lv, Zhengmei Zhu, Huabing Lu","doi":"10.3390/cimb47090700","DOIUrl":null,"url":null,"abstract":"<p><p>The Dof (DNA binding with one finger) protein is one of the unique transcription factors in plants, and it plays an important role in plant growth and stress response. Sesame is an oil-bearing crop with high oil content and rich nutrition. In this study, 34 <i>Dof</i> genes were identified in the sesame genome using bioinformatics technology, and their physicochemical properties, gene structure, conserved motifs, tissue-specific expression and functions in fatty acid synthesis were preliminarily analyzed. The results showed that although there were differences in sequence length, molecular weight and isoelectric point, SiDofs all contained a conservative zinc finger structure, which could be divided into three categories in phylogeny. All 34 <i>SiDof</i> genes contain 1-2 exons, and the conserved motifs among subfamilies are similar. Tissue-specific expression analysis showed that the expression levels of <i>SiDof8</i>, <i>SiDof10</i> and <i>SiDof34</i> were the highest in seeds 24 days after pollination. Overexpression of <i>SiDof8</i>, <i>SiDof10</i> and <i>SiDof34</i> could significantly increase the contents of C18:0, C18:1, C18:2 and C18:3, and all of them are located in the nucleus. There were Dof DNA binding elements in the promoter region of fatty acid synthesis genes. These results provide a theoretical basis for further study on the function of the sesame <i>Dof</i> genes and biological breeding.</p>","PeriodicalId":10839,"journal":{"name":"Current Issues in Molecular Biology","volume":"47 9","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2025-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12468942/pdf/","citationCount":"0","resultStr":"{\"title\":\"Genome Wide Identification of Sesame Dof Transcription Factors and Functional Analysis of SiDof8, SiDof10 and SiDof34 in Fatty Acid Synthesis.\",\"authors\":\"Feicui Zhang, Shanyu Chen, Feiling Song, Limin Shi, Xuegao Lv, Zhengmei Zhu, Huabing Lu\",\"doi\":\"10.3390/cimb47090700\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The Dof (DNA binding with one finger) protein is one of the unique transcription factors in plants, and it plays an important role in plant growth and stress response. Sesame is an oil-bearing crop with high oil content and rich nutrition. In this study, 34 <i>Dof</i> genes were identified in the sesame genome using bioinformatics technology, and their physicochemical properties, gene structure, conserved motifs, tissue-specific expression and functions in fatty acid synthesis were preliminarily analyzed. The results showed that although there were differences in sequence length, molecular weight and isoelectric point, SiDofs all contained a conservative zinc finger structure, which could be divided into three categories in phylogeny. All 34 <i>SiDof</i> genes contain 1-2 exons, and the conserved motifs among subfamilies are similar. Tissue-specific expression analysis showed that the expression levels of <i>SiDof8</i>, <i>SiDof10</i> and <i>SiDof34</i> were the highest in seeds 24 days after pollination. Overexpression of <i>SiDof8</i>, <i>SiDof10</i> and <i>SiDof34</i> could significantly increase the contents of C18:0, C18:1, C18:2 and C18:3, and all of them are located in the nucleus. There were Dof DNA binding elements in the promoter region of fatty acid synthesis genes. These results provide a theoretical basis for further study on the function of the sesame <i>Dof</i> genes and biological breeding.</p>\",\"PeriodicalId\":10839,\"journal\":{\"name\":\"Current Issues in Molecular Biology\",\"volume\":\"47 9\",\"pages\":\"\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2025-08-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12468942/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Current Issues in Molecular Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3390/cimb47090700\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Issues in Molecular Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3390/cimb47090700","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
Dof (DNA binding with one finger)蛋白是植物中独特的转录因子之一,在植物生长和胁迫反应中起着重要作用。芝麻是含油量高、营养丰富的油料作物。本研究利用生物信息学技术在芝麻基因组中鉴定了34个Dof基因,并对其理化性质、基因结构、保守基序、组织特异性表达及在脂肪酸合成中的功能进行了初步分析。结果表明,SiDofs虽然在序列长度、分子量和等电点上存在差异,但均含有保守的锌指结构,在系统发育上可分为三类。34个SiDof基因均含有1-2个外显子,亚家族间保守基序相似。组织特异性表达分析表明,SiDof8、SiDof10和SiDof34在授粉后24 d的种子中表达量最高。过表达SiDof8、SiDof10和SiDof34可显著增加C18:0、C18:1、C18:2和C18:3的含量,且均位于细胞核内。脂肪酸合成基因的启动子区存在Dof DNA结合元件。这些结果为进一步研究芝麻Dof基因的功能和生物育种提供了理论依据。
Genome Wide Identification of Sesame Dof Transcription Factors and Functional Analysis of SiDof8, SiDof10 and SiDof34 in Fatty Acid Synthesis.
The Dof (DNA binding with one finger) protein is one of the unique transcription factors in plants, and it plays an important role in plant growth and stress response. Sesame is an oil-bearing crop with high oil content and rich nutrition. In this study, 34 Dof genes were identified in the sesame genome using bioinformatics technology, and their physicochemical properties, gene structure, conserved motifs, tissue-specific expression and functions in fatty acid synthesis were preliminarily analyzed. The results showed that although there were differences in sequence length, molecular weight and isoelectric point, SiDofs all contained a conservative zinc finger structure, which could be divided into three categories in phylogeny. All 34 SiDof genes contain 1-2 exons, and the conserved motifs among subfamilies are similar. Tissue-specific expression analysis showed that the expression levels of SiDof8, SiDof10 and SiDof34 were the highest in seeds 24 days after pollination. Overexpression of SiDof8, SiDof10 and SiDof34 could significantly increase the contents of C18:0, C18:1, C18:2 and C18:3, and all of them are located in the nucleus. There were Dof DNA binding elements in the promoter region of fatty acid synthesis genes. These results provide a theoretical basis for further study on the function of the sesame Dof genes and biological breeding.
期刊介绍:
Current Issues in Molecular Biology (CIMB) is a peer-reviewed journal publishing review articles and minireviews in all areas of molecular biology and microbiology. Submitted articles are subject to an Article Processing Charge (APC) and are open access immediately upon publication. All manuscripts undergo a peer-review process.