合成生物分子马来酸二苯并咪唑的电荷转移和分子间相互作用分析:综合DFT方法

IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
C. Dabora Vincy, G. Bagavathi Sankar, R. S. Bemina, S. Madhan Kumar, S. Sahaya Jude Dhas, A. Arun Kumar, Joselin Beaula T
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引用次数: 0

摘要

分析了马来酸双苯并咪唑(BM)的FT-IR、FT-Raman和UV-Vis光谱。采用DFT方法进行量子计算,利用Gaussian '09软件寻找稳定的共形体并进行结构优化。对单晶的x射线衍射研究表明,生长的晶体是一个具有空间群的正交体系。为了研究分子系统中众多的分子内和分子间相互作用,进行了自然键轨道(NBO)分析。在完成法向坐标分析以识别振动模态后,建立PED赋值。根据振动分析,氢键给体NH和氢键受体CO2的拉伸波数由于相互作用发生了红移。DOS光谱分析用于研究分子轨道的贡献。HOMO-LUMO分析用于确定所研究化合物的电导率、反应性和稳定性。根据MEP图、Fukui函数和自然种群分析,COO−基团容易受到亲电攻击,而苯并咪唑环上的NH基团可能是亲核的。采用Kirby-Bauer圆盘扩散法测定BM对白色念珠菌和黑曲霉真菌病原菌的抑菌活性。分子对接研究用于阐明配体与蛋白质之间的相互作用。根据对BM分子的ADME参数分析和Lipinski规则,该化学物质具有良好的药物样质量,最终可能发展成为抗真菌药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Analysis on the charge transfer and intermolecular interaction of the synthesized biological molecule bis(benzimidazolium) maleate: a comprehensive DFT approach

The FT-IR, FT-Raman, and UV–Vis spectra of bis(benzimidazolium) maleate (BM) were analysed. Quantum computations with the DFT methodology were used for finding the stable conformer and structural optimization deploying the Gaussian '09 software. An X-ray diffraction study on a single crystal revealed that the grown crystal is an orthorhombic system with a space group. To examine the numerous intra- and intermolecular interactions in a molecular system, natural bond orbital (NBO) analysis is performed. After completing normal coordinate analysis to identify the vibrational modes, PED assignments were established. According to vibrational analysis, the stretching wavenumber of hydrogen bond donor NH and hydrogen bond acceptor CO2 is red-shifted due to interaction. DOS spectral analysis is used to investigate the molecular orbital contributions. The HOMO–LUMO analysis is used to determine the studied compound’s conductivity, reactivity, and stability. The COO groups are vulnerable to electrophilic attack, whereas the NH group in the benzimidazolium ring is probably nucleophilic, according to the MEP plot, Fukui function, and natural population analysis. The Kirby-Bauer disc diffusion technique was used to determine the antifungal activity of the BM against Candida albicans and Aspergillus niger fungal pathogens. Molecular docking studies were used to elucidate the interaction between ligands and proteins. According to ADME parameter analysis and the Lipinski rule for the BM molecule, the chemical possesses good drug-like qualities and could eventually be developed into an antifungal medication.

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来源期刊
Structural Chemistry
Structural Chemistry 化学-化学综合
CiteScore
3.80
自引率
11.80%
发文量
227
审稿时长
3.7 months
期刊介绍: Structural Chemistry is an international forum for the publication of peer-reviewed original research papers that cover the condensed and gaseous states of matter and involve numerous techniques for the determination of structure and energetics, their results, and the conclusions derived from these studies. The journal overcomes the unnatural separation in the current literature among the areas of structure determination, energetics, and applications, as well as builds a bridge to other chemical disciplines. Ist comprehensive coverage encompasses broad discussion of results, observation of relationships among various properties, and the description and application of structure and energy information in all domains of chemistry. We welcome the broadest range of accounts of research in structural chemistry involving the discussion of methodologies and structures,experimental, theoretical, and computational, and their combinations. We encourage discussions of structural information collected for their chemicaland biological significance.
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