基于几何一致性灰质/白质界面的颅脑损伤高阶中尺度模型

IF 4.8 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Denis Molchanov , Chaokai Zhang , Nan Lin , Songbai Ji , Zhangxian Yuan
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引用次数: 0

摘要

背景与目的:超毫米分辨率的脑损伤模型无法提供毫米或毫米以下尺度的空间细节应变,特别是在复杂的几何区域,如灰质/白质界面。此外,离散化误差导致的网格边界不一致可能导致界面附近的应变和应力分布不准确,而这些区域通常与创伤性脑损伤(TBI)的脆弱性升高有关。由于生成符合边界的网格和缓慢的收敛性,使用极小线性单元的传统方法不能有效地解决这一问题。方法:本研究采用非均匀理性b样条(NURBS)和等几何分析(IGA)来建立高阶中尺度模型,该模型平滑地表示具有高度分辨应变分布的复杂组织边界。我们解决了应用于大脑的关键挑战,包括从体素化图像分割中构建光滑的组织边界,以及克服由近乎不可压缩性引起的数值困难。结果:与使用线性元素的传统模型相比,高阶中尺度模型具有更高的效率,可以实现相同的精度,但自由度减少了两个数量级,计算成本至少减少了一个数量级。在灰质/白质界面处建立二维中尺度模型,模拟真实的冲击载荷。高阶中尺度模型发现了全局模型中缺失的弯曲组织边界处的应变浓度(例如,高达20%的量级差异)。应变分布也存在显著差异,在界面附近采样的应变的标准化均方根误差高达7.7%。这些应变差异对下游轴索损伤模型模拟具有重要意义。结论:本研究证明了利用IGA开发具有一致组织边界的中尺度脑模型的独特潜力,对于填补多尺度建模框架中全局和细胞脑损伤模型之间的关键空白具有重要意义。该技术是通用的和可扩展的,因为它适用于各种二维和三维生物力学问题,包括和超越脑生物力学。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
High-order mesoscale modeling with geometrically conforming gray/white matter interface for traumatic brain injury

Background and Objective:

Brain injury models with a supramillimeter resolution are not feasible to provide spatially detailed strains at or below millimeter scales, especially in regions of convoluted geometry such as at the gray/white matter interface. Furthermore, non-conforming mesh boundaries resulting from discretization errors can lead to inaccurate strain and stress distributions near interfaces, areas typically associated with elevated vulnerabilities in traumatic brain injury (TBI). Conventional approaches using extremely small linear elements are not effective to address the issue because of challenges in generating boundary-conforming meshes and slow convergence.

Methods:

In this study, we adapt the Non-Uniform Rational B-Splines (NURBS) and isogeometric analysis (IGA) to develop high-order mesoscale models that smoothly represent complex tissue boundaries with highly resolved strain distributions. We address key challenges for applications to the brain, including the construction of smooth tissue boundaries from voxelized image segmentation and overcoming numerical difficulties arising from near-incompressibility.

Results:

Compared to the conventional model using linear elements, the high-order mesoscale model demonstrates superior efficiency by achieving the same accuracy but with two orders of magnitude fewer degrees of freedom and at least one order of magnitude reduction in computational cost. Two-dimensional mesoscale models are constructed at gray/white matter interface to simulate realistic impact loading. The high-order mesoscale models discover strain concentration at the convoluted tissue boundary missing from the global model (e.g., up to 20% difference in magnitude). Notable differences in strain distribution also exist, with a normalized root mean squared error of up to 7.7% for strains sampled near the interface. These strain differences have major implications on downstream axonal injury model simulations.

Conclusion:

This study demonstrates the unique potential of leveraging IGA to develop mesoscale brain models with conforming tissue boundaries, and is important for filling a critical gap between global and cellular brain injury models in a multiscale modeling framework. The technique is general and scalable as it is applicable to diverse two- and three-dimensional biomechanical problems, including and beyond brain biomechanics.
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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