Faridoddin Shariaty , Mobin Mohebi , Erfan Barzegar-Golmoghani , Vitalii Pavlov , Seyed Hamid Aghlmand Sarmi , Mohammad. H. Behzadpour , Masume Ahmadi , Sahar Ramezani Moghadam , Svetlana Fedyashina , Ali Mohammadzadeh , Ali Zahedmehr , Mohammad Javad Alemzadeh-Ansari , Ahmad Bitarafan-Rajabi
{"title":"基于U-Net和图像纹理表示(TRI)特征的深血管分割为提高冠状动脉造影的客观、自动化分析奠定了基础","authors":"Faridoddin Shariaty , Mobin Mohebi , Erfan Barzegar-Golmoghani , Vitalii Pavlov , Seyed Hamid Aghlmand Sarmi , Mohammad. H. Behzadpour , Masume Ahmadi , Sahar Ramezani Moghadam , Svetlana Fedyashina , Ali Mohammadzadeh , Ali Zahedmehr , Mohammad Javad Alemzadeh-Ansari , Ahmad Bitarafan-Rajabi","doi":"10.1016/j.cmpb.2025.109072","DOIUrl":null,"url":null,"abstract":"<div><h3>Background and Objective</h3><div>Coronary Artery Disease (CAD) diagnosis relies heavily on coronary angiography, yet interpretation suffers from variability. Deep learning (DL) offers potential for improvement, particularly in vessel segmentation, a critical step for analysis. This study aims to enhance vessel segmentation accuracy in angiography using a DL framework incorporating advanced preprocessing and texture features.</div></div><div><h3>Methods</h3><div>We developed a U-Net architecture integrating Texture Representation of Image (TRI) features (Haralick and Law features) to capture subtle vascular details. Advanced preprocessing (Laplacian Pyramid Restoration, Gaussian Differential Scale-Invariance) was applied to improve image quality. The model was pre-trained on the DRIVE dataset and fine-tuned using 7600 clinical angiography images. Performance was evaluated on a held-out test set (19 patients, ∼1700 images) from the same institution and benchmarked against the public ARCADE dataset. Statistical tests assessed performance improvements. Post-segmentation analysis included branching point detection and vessel diameter visualization using heatmaps.</div></div><div><h3>Results</h3><div>The proposed method achieved high segmentation performance on the clinical test set (Accuracy: 0.98, Precision: 0.87, Sensitivity: 0.91, F1-score: 0.89, IoU: 0.801, with CIs provided). Ablation studies confirmed statistically significant contributions from both preprocessing and TRI features (<em>p</em> < 0.01 for all metrics). Performance on the ARCADE benchmark was also strong (F1-score: 0.78), considering annotation differences.</div></div><div><h3>Conclusions</h3><div>Integrating TRI features and advanced preprocessing with a U-Net architecture significantly improves coronary angiography vessel segmentation. This provides a robust foundation for subsequent quantitative analysis potentially supporting CAD assessment. While limitations exist regarding external validation and direct clinical impact assessment, the enhanced segmentation capability represents a valuable advancement for angiographic image analysis tools.</div></div>","PeriodicalId":10624,"journal":{"name":"Computer methods and programs in biomedicine","volume":"272 ","pages":"Article 109072"},"PeriodicalIF":4.8000,"publicationDate":"2025-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Deep vessel segmentation with U-Net and texture representation of image (TRI) features provides a foundation for improved objective and automated analysis of coronary artery disease from angiography\",\"authors\":\"Faridoddin Shariaty , Mobin Mohebi , Erfan Barzegar-Golmoghani , Vitalii Pavlov , Seyed Hamid Aghlmand Sarmi , Mohammad. H. Behzadpour , Masume Ahmadi , Sahar Ramezani Moghadam , Svetlana Fedyashina , Ali Mohammadzadeh , Ali Zahedmehr , Mohammad Javad Alemzadeh-Ansari , Ahmad Bitarafan-Rajabi\",\"doi\":\"10.1016/j.cmpb.2025.109072\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background and Objective</h3><div>Coronary Artery Disease (CAD) diagnosis relies heavily on coronary angiography, yet interpretation suffers from variability. Deep learning (DL) offers potential for improvement, particularly in vessel segmentation, a critical step for analysis. This study aims to enhance vessel segmentation accuracy in angiography using a DL framework incorporating advanced preprocessing and texture features.</div></div><div><h3>Methods</h3><div>We developed a U-Net architecture integrating Texture Representation of Image (TRI) features (Haralick and Law features) to capture subtle vascular details. Advanced preprocessing (Laplacian Pyramid Restoration, Gaussian Differential Scale-Invariance) was applied to improve image quality. The model was pre-trained on the DRIVE dataset and fine-tuned using 7600 clinical angiography images. Performance was evaluated on a held-out test set (19 patients, ∼1700 images) from the same institution and benchmarked against the public ARCADE dataset. Statistical tests assessed performance improvements. Post-segmentation analysis included branching point detection and vessel diameter visualization using heatmaps.</div></div><div><h3>Results</h3><div>The proposed method achieved high segmentation performance on the clinical test set (Accuracy: 0.98, Precision: 0.87, Sensitivity: 0.91, F1-score: 0.89, IoU: 0.801, with CIs provided). Ablation studies confirmed statistically significant contributions from both preprocessing and TRI features (<em>p</em> < 0.01 for all metrics). Performance on the ARCADE benchmark was also strong (F1-score: 0.78), considering annotation differences.</div></div><div><h3>Conclusions</h3><div>Integrating TRI features and advanced preprocessing with a U-Net architecture significantly improves coronary angiography vessel segmentation. This provides a robust foundation for subsequent quantitative analysis potentially supporting CAD assessment. While limitations exist regarding external validation and direct clinical impact assessment, the enhanced segmentation capability represents a valuable advancement for angiographic image analysis tools.</div></div>\",\"PeriodicalId\":10624,\"journal\":{\"name\":\"Computer methods and programs in biomedicine\",\"volume\":\"272 \",\"pages\":\"Article 109072\"},\"PeriodicalIF\":4.8000,\"publicationDate\":\"2025-09-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer methods and programs in biomedicine\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0169260725004894\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer methods and programs in biomedicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169260725004894","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Deep vessel segmentation with U-Net and texture representation of image (TRI) features provides a foundation for improved objective and automated analysis of coronary artery disease from angiography
Background and Objective
Coronary Artery Disease (CAD) diagnosis relies heavily on coronary angiography, yet interpretation suffers from variability. Deep learning (DL) offers potential for improvement, particularly in vessel segmentation, a critical step for analysis. This study aims to enhance vessel segmentation accuracy in angiography using a DL framework incorporating advanced preprocessing and texture features.
Methods
We developed a U-Net architecture integrating Texture Representation of Image (TRI) features (Haralick and Law features) to capture subtle vascular details. Advanced preprocessing (Laplacian Pyramid Restoration, Gaussian Differential Scale-Invariance) was applied to improve image quality. The model was pre-trained on the DRIVE dataset and fine-tuned using 7600 clinical angiography images. Performance was evaluated on a held-out test set (19 patients, ∼1700 images) from the same institution and benchmarked against the public ARCADE dataset. Statistical tests assessed performance improvements. Post-segmentation analysis included branching point detection and vessel diameter visualization using heatmaps.
Results
The proposed method achieved high segmentation performance on the clinical test set (Accuracy: 0.98, Precision: 0.87, Sensitivity: 0.91, F1-score: 0.89, IoU: 0.801, with CIs provided). Ablation studies confirmed statistically significant contributions from both preprocessing and TRI features (p < 0.01 for all metrics). Performance on the ARCADE benchmark was also strong (F1-score: 0.78), considering annotation differences.
Conclusions
Integrating TRI features and advanced preprocessing with a U-Net architecture significantly improves coronary angiography vessel segmentation. This provides a robust foundation for subsequent quantitative analysis potentially supporting CAD assessment. While limitations exist regarding external validation and direct clinical impact assessment, the enhanced segmentation capability represents a valuable advancement for angiographic image analysis tools.
期刊介绍:
To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine.
Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.