金簇作为亚硝基抗癌药物创新载体的潜力:NBO和QTAIM分析的详细观点

IF 3 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Fatemeh Shams , Sharieh Hosseini , Kambiz Larijani , Marjan Jebeli Javan , Sepideh Ketabi
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引用次数: 0

摘要

本研究利用密度泛函理论(DFT)计算了亚硝基脲(Nu)与小金团簇(特别是Au4和Au6)之间的相互作用。利用分子中原子的量子理论(QTAIM)和自然键轨道(NBO)分析进一步阐明了这些相互作用的性质。结果表明,Nu药物与金簇具有较强的相互作用。在所研究的构象中,最稳定的Au4配合物的结合能为−23.31 kcal/mol。相比之下,最稳定的Au6构象Nu/Au6(1)在气相和水溶液中的结合能分别为- 9.54 kcal/mol和- 9.57 kcal/mol。重要的是,在与Nu分子的相互作用下,au簇的电子结构发生了显著的变化。稳定配合物能隙的减小可作为Nu吸附的化学指标。此外,与气相相比,在水环境中配合物的偶极矩增加了3% - 36%。对Nu配合物中Au-O键的分析表明,相对于其他研究的配合物,Nu - au4(2)的键是最强的。因此,Nu/Aun配合物在极性溶剂中具有很强的吸附能和良好的溶解度,因此作为Nu分子的载体具有很大的潜力。这些发现可能有助于纳米医学的未来发展。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

The potential of gold clusters as an innovative carrier for the nitrosoureas anticancer drug: Detailed view of NBO and QTAIM analyses

The potential of gold clusters as an innovative carrier for the nitrosoureas anticancer drug: Detailed view of NBO and QTAIM analyses
This study employed density functional theory (DFT) calculations to explore the interactions between nitrosourea (Nu) and small gold clusters, specifically Au4 and Au6. The nature of these interactions was further clarified using the quantum theory of atoms in molecules (QTAIM) and natural bond orbital (NBO) analyses. The results reveal that the Nu drug interacts strongly with the gold clusters. Among the conformers studied, the most stable Au4 complex exhibits a binding energy of −23.31 kcal/mol. In comparison, the most stable Au6 conformer, Nu/Au6 (1), shows binding energies of −9.54 kcal/mol in the gas phase and −9.57 kcal/mol in aqueous solution. Importantly, the electronic structure of the Aun clusters undergoes significant changes upon interaction with the Nu molecule. The decrease in the energy gap of the stable complexes serves as a chemical indicator of Nu adsorption. Furthermore, the dipole moments of the complexes increase by 3 %–36 % in aqueous environments compared to the gas phase. Analysis of the Au–O bond in the Nu complexes indicates that the bond is strongest in the Nu–Au4 (2) complex relative to the others studied. Consequently, Nu/Aun complexes show great potential as carriers for delivering the Nu molecule, owing to their strong adsorption energies and good solubility in polar solvents. These findings could contribute to future advancements in nanomedicine.
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来源期刊
Journal of molecular graphics & modelling
Journal of molecular graphics & modelling 生物-计算机:跨学科应用
CiteScore
5.50
自引率
6.90%
发文量
216
审稿时长
35 days
期刊介绍: The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design. As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.
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