Kübra Çalışkan , Mehmet Karataş , Paul M. Jordan , Burcu Çalışkan , Oliver Werz , Erden Banoglu
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Harnessing structure-activity relationships to repurpose the FLAP inhibitor BRP-7 into potent and selective sEH inhibitors
Soluble epoxide hydrolase (sEH) has emerged as a validated therapeutic target in inflammation-related conditions, particularly in cardiovascular, metabolic, and central nervous system disorders. In this study, we report the rational design, synthesis, and biological evaluation of a new class of benzimidazole-based amide derivatives as potent and selective inhibitors of sEH. These compounds were developed by scaffold optimization of BRP-7, a previously reported FLAP inhibitor, through strategic modifications at the C(2) and C(5) positions of the benzimidazole core, guided by SAR insights. Among the synthesized analogs, FP30 (BRP-821) exhibited exceptional sub-nM sEH inhibitory activity (IC50 = 0.4 nM), along with excellent metabolic stability in human liver microsomes (t1/2 > 184 min, ER < 0.27) and high solubility in simulated intestinal fluid (108 μM). Notably, the lead compounds demonstrated high selectivity over FLAP, distinguishing this new chemotype from dual inhibitors. Collectively, these findings highlight a promising new scaffold for further optimization toward the development of sEH-targeted therapeutics for the treatment of neuropathic pain and inflammatory diseases.
期刊介绍:
Bioorganic Chemistry publishes research that addresses biological questions at the molecular level, using organic chemistry and principles of physical organic chemistry. The scope of the journal covers a range of topics at the organic chemistry-biology interface, including: enzyme catalysis, biotransformation and enzyme inhibition; nucleic acids chemistry; medicinal chemistry; natural product chemistry, natural product synthesis and natural product biosynthesis; antimicrobial agents; lipid and peptide chemistry; biophysical chemistry; biological probes; bio-orthogonal chemistry and biomimetic chemistry.
For manuscripts dealing with synthetic bioactive compounds, the Journal requires that the molecular target of the compounds described must be known, and must be demonstrated experimentally in the manuscript. For studies involving natural products, if the molecular target is unknown, some data beyond simple cell-based toxicity studies to provide insight into the mechanism of action is required. Studies supported by molecular docking are welcome, but must be supported by experimental data. The Journal does not consider manuscripts that are purely theoretical or computational in nature.
The Journal publishes regular articles, short communications and reviews. Reviews are normally invited by Editors or Editorial Board members. Authors of unsolicited reviews should first contact an Editor or Editorial Board member to determine whether the proposed article is within the scope of the Journal.