Baiyang Zhang , Shunjie Chen , Keming Shen , Yang Wu , Pei Wang , Liugen Xue
{"title":"Tsallis统计增强了基因表达分类的逻辑回归。","authors":"Baiyang Zhang , Shunjie Chen , Keming Shen , Yang Wu , Pei Wang , Liugen Xue","doi":"10.1016/j.compbiomed.2025.111062","DOIUrl":null,"url":null,"abstract":"<div><div>Two kinds of Tsallis statistics-enhanced sigmoid functions are introduced based on <span><math><mi>q</mi></math></span>-deformed exponents for <span><math><mrow><mi>q</mi><mo><</mo><mn>1</mn></mrow></math></span> that are free of empirically chosen cutoffs. These generalizations of the classical sigmoid enables a more flexible and robust fitting method in the context of classification problems, particularly when dealing with complex, non-linear dependencies in data. The <span><math><mi>q</mi></math></span>-deformed classifiers are applied to four cancer datasets, demonstrating its robustness, noise resistance, and stability. In the simulated experiments, the improved algorithm outperforms traditional methods such as Logistic Regression, SVM, and Random Forest, with significantly smaller standard deviation. On real cancer datasets, Tsallis enhanced method achieves substantial improvements, particularly outperforming Logistic Regression with traditional sigmoid function with breast cancer data. These results demonstrate the exceptional robustness, noise resistance and stability of Tsallis statistics-enhanced method, making it a reliable solution for complex and noisy data environments.</div></div>","PeriodicalId":10578,"journal":{"name":"Computers in biology and medicine","volume":"197 ","pages":"Article 111062"},"PeriodicalIF":6.3000,"publicationDate":"2025-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Tsallis statistics enhanced logistic regression for gene expression classification\",\"authors\":\"Baiyang Zhang , Shunjie Chen , Keming Shen , Yang Wu , Pei Wang , Liugen Xue\",\"doi\":\"10.1016/j.compbiomed.2025.111062\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Two kinds of Tsallis statistics-enhanced sigmoid functions are introduced based on <span><math><mi>q</mi></math></span>-deformed exponents for <span><math><mrow><mi>q</mi><mo><</mo><mn>1</mn></mrow></math></span> that are free of empirically chosen cutoffs. These generalizations of the classical sigmoid enables a more flexible and robust fitting method in the context of classification problems, particularly when dealing with complex, non-linear dependencies in data. The <span><math><mi>q</mi></math></span>-deformed classifiers are applied to four cancer datasets, demonstrating its robustness, noise resistance, and stability. In the simulated experiments, the improved algorithm outperforms traditional methods such as Logistic Regression, SVM, and Random Forest, with significantly smaller standard deviation. On real cancer datasets, Tsallis enhanced method achieves substantial improvements, particularly outperforming Logistic Regression with traditional sigmoid function with breast cancer data. These results demonstrate the exceptional robustness, noise resistance and stability of Tsallis statistics-enhanced method, making it a reliable solution for complex and noisy data environments.</div></div>\",\"PeriodicalId\":10578,\"journal\":{\"name\":\"Computers in biology and medicine\",\"volume\":\"197 \",\"pages\":\"Article 111062\"},\"PeriodicalIF\":6.3000,\"publicationDate\":\"2025-09-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computers in biology and medicine\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0010482525014143\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computers in biology and medicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0010482525014143","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOLOGY","Score":null,"Total":0}
Tsallis statistics enhanced logistic regression for gene expression classification
Two kinds of Tsallis statistics-enhanced sigmoid functions are introduced based on -deformed exponents for that are free of empirically chosen cutoffs. These generalizations of the classical sigmoid enables a more flexible and robust fitting method in the context of classification problems, particularly when dealing with complex, non-linear dependencies in data. The -deformed classifiers are applied to four cancer datasets, demonstrating its robustness, noise resistance, and stability. In the simulated experiments, the improved algorithm outperforms traditional methods such as Logistic Regression, SVM, and Random Forest, with significantly smaller standard deviation. On real cancer datasets, Tsallis enhanced method achieves substantial improvements, particularly outperforming Logistic Regression with traditional sigmoid function with breast cancer data. These results demonstrate the exceptional robustness, noise resistance and stability of Tsallis statistics-enhanced method, making it a reliable solution for complex and noisy data environments.
期刊介绍:
Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.