改进软骨鱼监测和管理的快速DNA/ edna ID工具。

IF 5.5 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Marcela Maki Alvarenga, Ingrid Vasconcellos Bunholi, Aisni Mayumi C L Adachi, Marcelo Merten Cruz, Leonardo Manir Feitosa, Eduarda Valério de Jesus, Maria Eduarda Leda Lopes, Cintia Povill, Daniela Souza, Yan Torres, Antonio Mateo Solé-Cava, Rodrigo Rodrigues Domingues, Patricia Charvet, Vanessa Paes da Cruz
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引用次数: 0

摘要

基于DNA/ edna的快速识别工具可以检测特定的遗传模式,而不需要测序,这对生物多样性和野生动物贸易监测至关重要,特别是对具有保护意义的物种。然而,这些方法的实际应用仍然受到标准化协议的可用性、资源的可及性和不同分类群的覆盖范围的限制。对于软骨鱼来说,这一挑战尤其明显。由于捕捞和非法贸易,软骨鱼被严重过度捕捞,而保护评估数据匮乏。尽管具有重要的生态和经济意义,但许多物种缺乏数据库中的参考序列,以及其他分子数据和工具,阻碍了物种鉴定和贸易监管分子工具的发展。本文综述了目前基于DNA/ edna的快速检测软骨鱼物种的ID工具的现状,包括现有的和新兴的方法。它还汇编了现有的分类群特异性引物,以促进有效的物种鉴定,并推荐了最合适的方法。我们确定了分类学和地理覆盖方面的关键差距,强调需要进一步研究将这些工具扩展到代表性不足的物种和地区。此外,我们强调了将遗传方法纳入执法框架以加强保护策略和法规遵从性的重要性。本研究为实时、高性价比的遗传监测提供了参考,将为基于证据的决策提供支持,并促进基于DNA/ edna的快速ID工具在全球软骨鱼物种保护和管理中的实际应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Rapid DNA/eDNA-Based ID Tools for Improved Chondrichthyan Monitoring and Management.

Rapid DNA/eDNA-based ID tools, which detect specific genetic patterns without requiring sequencing, are essential for biodiversity and wildlife trade monitoring, particularly for species of conservation concern. However, the practical application of these methods remains limited by the availability of standardised protocols, accessibility of resources, and coverage across diverse taxa. This challenge is especially pronounced for Chondrichthyes, a group heavily overexploited due to fishing and illegal trade, and with data scarcity for conservation assessments. Despite their ecological and economic importance, many species lack reference sequences in databases, as well as other molecular data and tools, hindering the development of molecular tools for species identification and trade regulation. This review synthesises the current state of rapid DNA/eDNA-based ID tools for the detection of chondrichthyan species, including established and emerging methods. It also compiles available taxon-specific primers to facilitate efficient species identification and recommends the most suitable methods. We identify key gaps in taxonomic and geographic coverage, emphasising the need for further research to expand these tools to under-represented species and regions. Additionally, we highlight the importance of integrating genetic approaches into enforcement frameworks to enhance conservation strategies and regulatory compliance. By providing an accessible reference for time- and cost-effective genetic monitoring, this work will support evidence-based decision-making and improve the practical application of rapid DNA/eDNA-based ID tools in the conservation and management of Chondrichthyes species worldwide.

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来源期刊
Molecular Ecology Resources
Molecular Ecology Resources 生物-进化生物学
CiteScore
15.60
自引率
5.20%
发文量
170
审稿时长
3 months
期刊介绍: Molecular Ecology Resources promotes the creation of comprehensive resources for the scientific community, encompassing computer programs, statistical and molecular advancements, and a diverse array of molecular tools. Serving as a conduit for disseminating these resources, the journal targets a broad audience of researchers in the fields of evolution, ecology, and conservation. Articles in Molecular Ecology Resources are crafted to support investigations tackling significant questions within these disciplines. In addition to original resource articles, Molecular Ecology Resources features Reviews, Opinions, and Comments relevant to the field. The journal also periodically releases Special Issues focusing on resource development within specific areas.
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