Bhatu R. Patil , Kisan Pawara , Matin Shaikh , Faizan Ahmed , Chandragouda R. Patil , Chandrakant S. Gawli , Chanakya Nath Kundu , Biswajit Das , Iqrar Ahmad , Harun M. Patel
{"title":"基于喹唑啉的第四代EGFR酪氨酸激酶抑制剂克服非小细胞肺癌(NSCLC)中c797s介导的耐药","authors":"Bhatu R. Patil , Kisan Pawara , Matin Shaikh , Faizan Ahmed , Chandragouda R. Patil , Chandrakant S. Gawli , Chanakya Nath Kundu , Biswajit Das , Iqrar Ahmad , Harun M. Patel","doi":"10.1016/j.bioorg.2025.108991","DOIUrl":null,"url":null,"abstract":"<div><div>The emergence of resistance mutations, particularly C797S, in epidermal growth factor receptor tyrosine kinase (EGFR-TK) has significantly limited the long-term efficacy of Osimertinib in non-small cell lung cancer (NSCLC). In this study, we designed and evaluated a series of quinazoline derivatives targeting the triple mutant EGFR (L858R/T790M/C797S). Among them, compound <strong>8d</strong> exhibited the highest potency against EGFR L858R/T790M/C797S, with an IC₅₀ of 0.068 μM, demonstrating strong binding affinity and effective suppression of kinase activity compared to Osimertinib. Molecular docking studies revealed key interactions with catalytic Lys745. Molecular dynamics (MD) simulations over 100 ns confirmed ligand stability, with an average root-mean-square deviation (RMSD) below 2.0 Å and a binding free energy of −44 kcal/mol (MM/GBSA). Structure-activity relationship (SAR) analysis highlighted the critical role of a bulkier hydrophobic substituent at the C2 position of the quinazoline ring in combination with a sulfonyl group, which improved affinity and potency. These findings establish quinazoline derivatives, particularly compound <strong>8d</strong>, as promising fourth-generation EGFR inhibitors for overcoming C797S-mediated resistance in NSCLC therapy.</div></div>","PeriodicalId":257,"journal":{"name":"Bioorganic Chemistry","volume":"165 ","pages":"Article 108991"},"PeriodicalIF":4.7000,"publicationDate":"2025-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Quinazoline-based fourth-generation EGFR tyrosine kinase inhibitors to overcome C797S-mediated resistance in non-small cell lung Cancer (NSCLC)\",\"authors\":\"Bhatu R. Patil , Kisan Pawara , Matin Shaikh , Faizan Ahmed , Chandragouda R. Patil , Chandrakant S. Gawli , Chanakya Nath Kundu , Biswajit Das , Iqrar Ahmad , Harun M. Patel\",\"doi\":\"10.1016/j.bioorg.2025.108991\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The emergence of resistance mutations, particularly C797S, in epidermal growth factor receptor tyrosine kinase (EGFR-TK) has significantly limited the long-term efficacy of Osimertinib in non-small cell lung cancer (NSCLC). In this study, we designed and evaluated a series of quinazoline derivatives targeting the triple mutant EGFR (L858R/T790M/C797S). Among them, compound <strong>8d</strong> exhibited the highest potency against EGFR L858R/T790M/C797S, with an IC₅₀ of 0.068 μM, demonstrating strong binding affinity and effective suppression of kinase activity compared to Osimertinib. Molecular docking studies revealed key interactions with catalytic Lys745. Molecular dynamics (MD) simulations over 100 ns confirmed ligand stability, with an average root-mean-square deviation (RMSD) below 2.0 Å and a binding free energy of −44 kcal/mol (MM/GBSA). Structure-activity relationship (SAR) analysis highlighted the critical role of a bulkier hydrophobic substituent at the C2 position of the quinazoline ring in combination with a sulfonyl group, which improved affinity and potency. These findings establish quinazoline derivatives, particularly compound <strong>8d</strong>, as promising fourth-generation EGFR inhibitors for overcoming C797S-mediated resistance in NSCLC therapy.</div></div>\",\"PeriodicalId\":257,\"journal\":{\"name\":\"Bioorganic Chemistry\",\"volume\":\"165 \",\"pages\":\"Article 108991\"},\"PeriodicalIF\":4.7000,\"publicationDate\":\"2025-09-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Bioorganic Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0045206825008715\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bioorganic Chemistry","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0045206825008715","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Quinazoline-based fourth-generation EGFR tyrosine kinase inhibitors to overcome C797S-mediated resistance in non-small cell lung Cancer (NSCLC)
The emergence of resistance mutations, particularly C797S, in epidermal growth factor receptor tyrosine kinase (EGFR-TK) has significantly limited the long-term efficacy of Osimertinib in non-small cell lung cancer (NSCLC). In this study, we designed and evaluated a series of quinazoline derivatives targeting the triple mutant EGFR (L858R/T790M/C797S). Among them, compound 8d exhibited the highest potency against EGFR L858R/T790M/C797S, with an IC₅₀ of 0.068 μM, demonstrating strong binding affinity and effective suppression of kinase activity compared to Osimertinib. Molecular docking studies revealed key interactions with catalytic Lys745. Molecular dynamics (MD) simulations over 100 ns confirmed ligand stability, with an average root-mean-square deviation (RMSD) below 2.0 Å and a binding free energy of −44 kcal/mol (MM/GBSA). Structure-activity relationship (SAR) analysis highlighted the critical role of a bulkier hydrophobic substituent at the C2 position of the quinazoline ring in combination with a sulfonyl group, which improved affinity and potency. These findings establish quinazoline derivatives, particularly compound 8d, as promising fourth-generation EGFR inhibitors for overcoming C797S-mediated resistance in NSCLC therapy.
期刊介绍:
Bioorganic Chemistry publishes research that addresses biological questions at the molecular level, using organic chemistry and principles of physical organic chemistry. The scope of the journal covers a range of topics at the organic chemistry-biology interface, including: enzyme catalysis, biotransformation and enzyme inhibition; nucleic acids chemistry; medicinal chemistry; natural product chemistry, natural product synthesis and natural product biosynthesis; antimicrobial agents; lipid and peptide chemistry; biophysical chemistry; biological probes; bio-orthogonal chemistry and biomimetic chemistry.
For manuscripts dealing with synthetic bioactive compounds, the Journal requires that the molecular target of the compounds described must be known, and must be demonstrated experimentally in the manuscript. For studies involving natural products, if the molecular target is unknown, some data beyond simple cell-based toxicity studies to provide insight into the mechanism of action is required. Studies supported by molecular docking are welcome, but must be supported by experimental data. The Journal does not consider manuscripts that are purely theoretical or computational in nature.
The Journal publishes regular articles, short communications and reviews. Reviews are normally invited by Editors or Editorial Board members. Authors of unsolicited reviews should first contact an Editor or Editorial Board member to determine whether the proposed article is within the scope of the Journal.