溴蜻蜓与5-HT2A受体结合的硅表征:一种有效设计致幻剂的分子见解。

IF 2.8 4区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Syeda Sumayya Tariq, Urooj Qureshi, Mamona Mushtaq, Sajida Munsif, Mohammad Nur-E-Alam, Mohammed F Hawwal, Yan Wang, Zaheer Ul-Haq
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引用次数: 0

摘要

溴蜻蜓(Bromo-DragonFLY, BDF)是一种具有致幻特性的强效设计致幻剂,近年来成为一种重要的娱乐性药物。BDF因其类似蜻蜓的分子结构而得名,它能引起长时间的迷幻效果,幻觉持续数天。临床报告强调了严重的毒性,包括精神错乱、心动过速、高血压、癫痫发作、肾功能衰竭,在极端情况下,甚至死亡。BDF作为5-HT2A 5-羟色胺受体亚型的有效激动剂,介导致幻剂的行为和迷幻作用。尽管BDF的发病率越来越高,并具有相关的临床意义,但BDF与5-HT2A相互作用的确切分子机制仍然没有得到充分的表征,特别是从计算机角度来看。本研究通过采用全面的硅框架来研究BDF与5-HT2A受体的分子相互作用,从而解决了这一空白。分子对接用于确定结合位点,而全原子分子动力学(MD)模拟提供了对蛋白质-配体复合物稳定性的深入了解,评估偏差、局部灵活性和随时间变化的旋转模式。结果表明,BDF与5-HT2A之间形成稳定紧凑的配合物,每残基波动最小,氢键占用率高,表明BDF与5-HT2A之间具有高度稳定的相互作用。此外,利用机器学习算法的主成分分析表明,BDF-5-HT2A复合物的运动是一致的,而自由能剖面则强调了稳定的能量盆地,变化最小。这些发现表明BDF与5 -羟色胺受体具有很强的结合亲和力,导致高度稳定的复合物形成。这项研究提供了对BDF分子相互作用的基本理解,为其作为一种强效致幻剂的作用提供了关键的见解,并为未来研究新型设计药物带来的风险奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In Silico Characterization of Bromo-DragonFLY Binding to the 5-HT2A Receptor: Molecular Insights Into a Potent Designer Psychedelic.

Bromo-DragonFLY (BDF), a potent designer psychedelic drug with hallucinogenic properties, has recently emerged as a significant recreational substance. Named for its dragonfly-like molecular structure, BDF induces prolonged psychedelic effects, with hallucinations lasting several days. Clinical reports highlight severe toxicity, including confusion, tachycardia, hypertension, seizures, renal failure, and, in extreme cases, death. BDF acts as a potent agonist of the 5-HT2A serotonin receptor subtype, which mediates the behavioral and psychedelic effects of hallucinogens. Despite its increasing prevalence and associated clinical implications, the precise molecular mechanisms underlying BDF's interaction with 5-HT2A remain inadequately characterized, particularly from an in silico perspective. This study addresses this gap by employing a comprehensive in silico framework to investigate the molecular interactions of BDF with the 5-HT2A receptor. Molecular docking was used to identify binding sites, while all-atom molecular dynamics (MD) simulations provided insights into the stability of the protein-ligand complex, assessing deviations, local flexibility, and time-dependent gyration patterns. The results revealed stable and compact complex formation between BDF and 5-HT2A, characterized by minimal per-residue fluctuations and high hydrogen bond occupancy, suggesting a highly stable interaction as shown experimentally. Additionally, principal component analysis, leveraging machine learning algorithms, demonstrated consistent motion, while free energy profiles highlighted stable energy basins with minimal variations for the BDF-5-HT2A complex. These findings suggest strong binding affinities of BDF with the serotonin receptor, leading to highly stable complex formation. This study provides a foundational understanding of BDF's molecular interactions, offering critical insights into its role as a potent psychedelic agent and laying the groundwork for future investigations into the risks posed by novel designer drugs.

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来源期刊
Proteins-Structure Function and Bioinformatics
Proteins-Structure Function and Bioinformatics 生物-生化与分子生物学
CiteScore
5.90
自引率
3.40%
发文量
172
审稿时长
3 months
期刊介绍: PROTEINS : Structure, Function, and Bioinformatics publishes original reports of significant experimental and analytic research in all areas of protein research: structure, function, computation, genetics, and design. The journal encourages reports that present new experimental or computational approaches for interpreting and understanding data from biophysical chemistry, structural studies of proteins and macromolecular assemblies, alterations of protein structure and function engineered through techniques of molecular biology and genetics, functional analyses under physiologic conditions, as well as the interactions of proteins with receptors, nucleic acids, or other specific ligands or substrates. Research in protein and peptide biochemistry directed toward synthesizing or characterizing molecules that simulate aspects of the activity of proteins, or that act as inhibitors of protein function, is also within the scope of PROTEINS. In addition to full-length reports, short communications (usually not more than 4 printed pages) and prediction reports are welcome. Reviews are typically by invitation; authors are encouraged to submit proposed topics for consideration.
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