水平转移的无细胞染色质颗粒作为自主的“卫星基因组”和宿主细胞内转座因子的载体。

IF 6.4 1区 生物学 Q1 BIOLOGY
eLife Pub Date : 2025-09-15 DOI:10.7554/eLife.103771
Soumita Banerjee, Soniya Sanjay Shende, Laxmi Kata, Relestina Simon Lopes, Swathika Praveen, Ruchi Joshi, Naveen Kumar Khare, Gorantla V Raghuram, Snehal Shabrish, Indraneel Mittra
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引用次数: 0

摘要

水平基因转移(HGT)在原核生物中起着重要的进化作用,但在哺乳动物中并不常见。我们之前报道了无细胞染色质颗粒(cfChPs)——从人类血液中循环的数十亿垂死细胞释放的染色体片段——水平转移到具有生物效应的健康细胞中。然而,这些影响的潜在机制和功能尚不清楚。我们用从人血清中分离的cfChPs处理NIH3T3小鼠成纤维细胞,并对细胞进行序列传代。利用染色质纤维荧光、细胞遗传学分析、免疫荧光和荧光原位杂交分析cfChPs的细胞内活性。我们发现内化的cfChPs几乎完全由非编码DNA组成,其中包含的不同DNA序列随机组合形成复杂的串联体,其中一些是数百万个碱基对的大小。串联体自主地完成了核基因组的许多功能,如DNA、RNA和蛋白质的合成。它们含有人类LINE-1和Alu元素,具有在小鼠基因组中重新排列自己的潜力。我们的研究结果表明,一个细胞同时拥有两种自主的基因组形式:一种是遗传的(遗传基因组),另一种是获得的(卫星基因组)。卫星基因组可能具有进化功能,因为它们能够作为转座因子的载体,并产生过多的新蛋白质。我们的研究结果还表明,“自我”HGT可能通过cfChP串联体的媒介大规模地发生在哺乳动物中,这些串联体经历了广泛而复杂的修饰,导致它们的行为成为“外来”遗传因素。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Horizontally transferred cell-free chromatin particles function as autonomous 'satellite genomes' and vehicles for transposable elements within host cells.

Horizontal gene transfer (HGT) plays an important evolutionary role in prokaryotes, but it is less frequent in mammals. We previously reported that cell-free chromatin particles (cfChPs) - chromosomal fragments released from the billions of dying cells that circulate in human blood - are horizontally transferred to healthy cells with biological effects. However, the underlying mechanism and function of these effects remained unclear. We treated NIH3T3 mouse fibroblasts cells with cfChPs isolated from human serum and serially passaged the cells. The intracellular activities of cfChPs were analysed using chromatin fibre fluorography, cytogenetic analysis, immunofluorescence, and fluorescent in situ hybridisation. We discovered that the internalised cfChPs were almost exclusively comprised of non-coding DNA, and the disparate DNA sequences contained within them had randomly combined to form complex concatemers, some of which were multi-mega base pairs in size. The concatemers autonomously performed many functions attributable to the nuclear genome such as DNA, RNA and protein synthesis. They harboured human LINE-1 and Alu elements, with the potential to rearrange themselves within the mouse genome. Our results suggest that a cell simultaneously harbours two autonomous genome forms: one that is inherited (hereditary genome) and numerous others that are acquired (satellite genomes). The satellite genomes may have evolutionary functions given their ability to serve as vehicles for transposable elements and to generate a plethora of novel proteins. Our results also suggest that 'within-self' HGT may occur in mammals on a massive scale via the medium of cfChP concatemers that have undergone extensive and complex modifications resulting in their behaviour as 'foreign' genetic elements.

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来源期刊
eLife
eLife BIOLOGY-
CiteScore
12.90
自引率
3.90%
发文量
3122
审稿时长
17 weeks
期刊介绍: eLife is a distinguished, not-for-profit, peer-reviewed open access scientific journal that specializes in the fields of biomedical and life sciences. eLife is known for its selective publication process, which includes a variety of article types such as: Research Articles: Detailed reports of original research findings. Short Reports: Concise presentations of significant findings that do not warrant a full-length research article. Tools and Resources: Descriptions of new tools, technologies, or resources that facilitate scientific research. Research Advances: Brief reports on significant scientific advancements that have immediate implications for the field. Scientific Correspondence: Short communications that comment on or provide additional information related to published articles. Review Articles: Comprehensive overviews of a specific topic or field within the life sciences.
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