用QM-ML杂交方法预测芳香族C─H硫代蒽醌化反应的可行性和选择性。

IF 16.9
Lukas M Sigmund, Tina Seifert, Riya Halder, Giulia Bergonzini, Magnus J Johansson, Per-Ola Norrby, Kjell Jorner, Mikhail Kabeshov
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引用次数: 0

摘要

芳香C─H键的直接硫代化是一种有价值的后期功能化策略,可以帮助开发新药等。我们在此提出了一个基于半经验量子力学和机器学习的预测计算模型,称为patch。它将每个Caromatic-H单元分类为反应性或非反应性,准确率在90%以上。它可以同时解决位点选择性和反应可行性问题与硫代蒽醌协议。首先,这是通过选择精心设计的特征来实现的,这些特征考虑到电子和空间对位点选择性的影响。其次,采用平行实验的方法,用54个新的阴性反应(不成功的thianthrenation)来补充现有的文献数据,我们认为这对开发patch工具很有帮助。最终,我们成功地将该模型应用于一个具有挑战性的测试集,包括碳环与杂环功能化之间的区分,鉴定被报道导致异构体产物混合物的底物,以及不能被薄蒽化的分子。计算预测得到了实验验证。patch工具可从https://github.com/MolecularAI/thianthrenation_prediction免费获取。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Predicting Reaction Feasibility and Selectivity of Aromatic C─H Thianthrenation with a QM-ML Hybrid Approach.

The direct thianthrenation of aromatic C─H bonds is a valuable late-stage functionalization strategy that can assist, for example, the development of new drugs. We herein present a predictive computational model for this reaction, denoted PATTCH, which is based on semiempirical quantum mechanics and machine learning. It classifies each Caromatic-H unit either as reactive or not with an accuracy of above 90%. It can address both the site-selectivity and reaction feasibility question associated with the thianthrenation protocol. First, this was achieved by selecting carefully engineered features, which take into account the electronic and steric influence on the site-selectivity. Second, parallel experimentation was used to supplement the available literature data with 54 new negative reactions (unsuccessful thianthrenation), which we show was instrumental for developing the PATTCH tool. Ultimately, we successfully applied the model to a challenging test set encompassing the differentiation between carbocycle versus heterocycle functionalization, the identification of substrates that were reported to result in a mixture of isomeric products, and to molecules that could not be thianthrenated. The computational predictions were experimentally validated. The PATTCH tool can be obtained free of charge from https://github.com/MolecularAI/thianthrenation_prediction.

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