Samuel E Wirth,Svetlana Pakhomova,Olga V Belyaeva,William E Boeglin,Alan R Brash,Marcia E Newcomer,Natalia Y Kedishvili,Kirill M Popov
{"title":"自然突变对氧化脂代谢脱氢酶还原酶功能的影响。","authors":"Samuel E Wirth,Svetlana Pakhomova,Olga V Belyaeva,William E Boeglin,Alan R Brash,Marcia E Newcomer,Natalia Y Kedishvili,Kirill M Popov","doi":"10.1016/j.jbc.2025.110704","DOIUrl":null,"url":null,"abstract":"Recent evidence indicates dehydrogenase reductase 9 (DHRS9) can oxidize and alter the biological activity of a diverse group of oxylipin substrates, underscoring the importance of DHRS9 in the regulation of a variety of biological processes such as inflammation, cell proliferation, and tissue repair. Importantly, mutations in DHRS9 gene resulting in amino acid substitutions S202L and D286H have been linked to an early onset case of epilepsy; whether these mutations affect the function of DHRS9 has not been investigated. The results of this study demonstrate that both mutations cause significant loss of DHRS9 functionality. However, in the case of S202L variant, the loss of catalytic activity likely stems from the impaired protein folding and/or protein stability. On the other hand, D286H DHRS9 mutant protein is relatively more stable than S202L variant, but its Km value for NAD+ (2.85 mM) is nearly 12-fold higher than that of the wild type enzyme. The three-dimensional structure of DHRS9 solved in this study provides insights into the functions of S202 and D286 residues. In addition, it reveals a strikingly large substrate binding cavity, consistent with the fact that the enzyme can process oxygenated hydrocarbons with abundant rotational freedom and of differing lengths (18-22 C). Considering that expression levels of DHRS9 in human tissues are highly sensitive to inflammatory conditions, and the existence of naturally occurring mutations in DHRS9, the structural and functional characterization of DHRS9 reported in this study is critical for a better understanding of the role of DHRS9 in inflammatory processes.","PeriodicalId":15140,"journal":{"name":"Journal of Biological Chemistry","volume":"16 1","pages":"110704"},"PeriodicalIF":4.0000,"publicationDate":"2025-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"The effects of naturally occurring mutations on functionality of oxylipin metabolizing dehydrogenase reductase 9.\",\"authors\":\"Samuel E Wirth,Svetlana Pakhomova,Olga V Belyaeva,William E Boeglin,Alan R Brash,Marcia E Newcomer,Natalia Y Kedishvili,Kirill M Popov\",\"doi\":\"10.1016/j.jbc.2025.110704\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Recent evidence indicates dehydrogenase reductase 9 (DHRS9) can oxidize and alter the biological activity of a diverse group of oxylipin substrates, underscoring the importance of DHRS9 in the regulation of a variety of biological processes such as inflammation, cell proliferation, and tissue repair. Importantly, mutations in DHRS9 gene resulting in amino acid substitutions S202L and D286H have been linked to an early onset case of epilepsy; whether these mutations affect the function of DHRS9 has not been investigated. The results of this study demonstrate that both mutations cause significant loss of DHRS9 functionality. However, in the case of S202L variant, the loss of catalytic activity likely stems from the impaired protein folding and/or protein stability. On the other hand, D286H DHRS9 mutant protein is relatively more stable than S202L variant, but its Km value for NAD+ (2.85 mM) is nearly 12-fold higher than that of the wild type enzyme. The three-dimensional structure of DHRS9 solved in this study provides insights into the functions of S202 and D286 residues. In addition, it reveals a strikingly large substrate binding cavity, consistent with the fact that the enzyme can process oxygenated hydrocarbons with abundant rotational freedom and of differing lengths (18-22 C). Considering that expression levels of DHRS9 in human tissues are highly sensitive to inflammatory conditions, and the existence of naturally occurring mutations in DHRS9, the structural and functional characterization of DHRS9 reported in this study is critical for a better understanding of the role of DHRS9 in inflammatory processes.\",\"PeriodicalId\":15140,\"journal\":{\"name\":\"Journal of Biological Chemistry\",\"volume\":\"16 1\",\"pages\":\"110704\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2025-09-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biological Chemistry\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1016/j.jbc.2025.110704\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biological Chemistry","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.jbc.2025.110704","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
The effects of naturally occurring mutations on functionality of oxylipin metabolizing dehydrogenase reductase 9.
Recent evidence indicates dehydrogenase reductase 9 (DHRS9) can oxidize and alter the biological activity of a diverse group of oxylipin substrates, underscoring the importance of DHRS9 in the regulation of a variety of biological processes such as inflammation, cell proliferation, and tissue repair. Importantly, mutations in DHRS9 gene resulting in amino acid substitutions S202L and D286H have been linked to an early onset case of epilepsy; whether these mutations affect the function of DHRS9 has not been investigated. The results of this study demonstrate that both mutations cause significant loss of DHRS9 functionality. However, in the case of S202L variant, the loss of catalytic activity likely stems from the impaired protein folding and/or protein stability. On the other hand, D286H DHRS9 mutant protein is relatively more stable than S202L variant, but its Km value for NAD+ (2.85 mM) is nearly 12-fold higher than that of the wild type enzyme. The three-dimensional structure of DHRS9 solved in this study provides insights into the functions of S202 and D286 residues. In addition, it reveals a strikingly large substrate binding cavity, consistent with the fact that the enzyme can process oxygenated hydrocarbons with abundant rotational freedom and of differing lengths (18-22 C). Considering that expression levels of DHRS9 in human tissues are highly sensitive to inflammatory conditions, and the existence of naturally occurring mutations in DHRS9, the structural and functional characterization of DHRS9 reported in this study is critical for a better understanding of the role of DHRS9 in inflammatory processes.
期刊介绍:
The Journal of Biological Chemistry welcomes high-quality science that seeks to elucidate the molecular and cellular basis of biological processes. Papers published in JBC can therefore fall under the umbrellas of not only biological chemistry, chemical biology, or biochemistry, but also allied disciplines such as biophysics, systems biology, RNA biology, immunology, microbiology, neurobiology, epigenetics, computational biology, ’omics, and many more. The outcome of our focus on papers that contribute novel and important mechanistic insights, rather than on a particular topic area, is that JBC is truly a melting pot for scientists across disciplines. In addition, JBC welcomes papers that describe methods that will help scientists push their biochemical inquiries forward and resources that will be of use to the research community.