不透明红球菌1CP和伴生扎瓦菌Z-1155氧化苯乙烯异构酶的功能表征和膜定位。

IF 3.8 2区 生物学 Q2 MICROBIOLOGY
Selvapravin Kumaran, Shanice Olanipekun, Latife Sönmez, Lars Janzen, Peter-Leon Hagedoorn, Dirk Tischler
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引用次数: 0

摘要

苯乙烯氧化物异构酶(SOI)是苯乙烯降解酶复合物的一部分,执行有毒中间体苯乙烯氧化物异构化为苯乙醛。多年来,该酶被认为是不依赖于辅助因子的,因此,该酶的机制被认为是酸碱催化。最近,假单胞菌VLB120的SOI中发现并报道了血红素的存在。此外,膜定位自发现以来也被假设,但缺乏实验证明。在这项研究中,我们强调了两种细菌菌株(不透明红球菌1CP和伴扎瓦兹菌Z-1155)的SOIs的定位,这两种细菌通过sfgfp标记的融合物在大肠杆菌的细胞膜中异种过量产生。此外,对SOI中酸性和碱性氨基酸的定点诱变也表明组氨酸-57是血红素的轴向配体。电子顺磁共振(EPR)和生物催化分析表明精氨酸-111可能配位血红素的丙酸基团。对不同标记的sfGFP(带和不带连接子)的功能分析,以及从1CP和Z-1155中截断SOI的末端延伸,表明它们可能在适当的底物通道中发挥作用。它也支持了先前提出的SOI作为苯乙烯降解途径中其他酶的膜锚的作用。重要性:苯乙烯氧化物异构酶(SOI)在苯乙烯降解途径的侧链氧化中催化苯乙烯氧化物异构化为苯乙醛。尽管在这一途径中发挥着关键作用,但人们对该酶的生物学和生物化学知之甚少,特别是其催化机制、膜定位和结构-功能关系。从不透明红球菌(Rhodococcus opacus)和伴扎瓦菌(Zavarzinia comansoris)中提取SOIs作为SUMO/sfGFP/mCherry融合蛋白。我们成功地实现了过量生产,并进行了定点诱变来了解催化机制,进行了全细胞实验,使用荧光显微镜来评估膜定位,并构建了末端截断来评估结构-功能关系。定点突变显示组氨酸-57是血红素的轴向配体。sfgfp融合的荧光显微镜显示,SOI是一种膜结合蛋白,其两端都位于细胞质中。不同标记SOI的活性差异和末端延伸的截断表明,末端可能促进适当的底物通道。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Functional characterization and membrane localization of the styrene oxide isomerase from Rhodococcus opacus 1CP and Zavarzinia compransoris Z-1155.

Styrene oxide isomerase (SOI) is a part of the styrene degradation enzyme complex, performing the isomerization of toxic intermediate styrene oxide into phenylacetaldehyde. For many years, the enzyme was believed to be cofactor-independent, and hence, the mechanism of this enzyme was proposed to be acid-base catalysis. Recently, the presence of heme was identified and reported in SOI from Pseudomonas sp. VLB120. Alongside, the membrane localization was also postulated since its discovery but lacks experimental proof. In this study, we highlight the localization of SOIs from two bacterial strains, Rhodococcus opacus 1CP and Zavarzinia compransoris Z-1155, heterologously overproduced in the cell membrane of E. coli via sfGFP-tagged fusions. In addition, the site-directed mutagenesis of acidic and basic amino acids in SOI from 1CP also showcased that histidine-57 is the axial ligand to the heme. Electron paramagnetic resonance (EPR) and biocatalytic assays showed arginine-111 possibly coordinating the propionate group of heme. The functional assays of differently tagged sfGFP with and without linkers, and the truncation of the terminal extension of SOI from 1CP and Z-1155, indicate their possible role in proper substrate channeling. It also supports the previously proposed SOI role as a membrane anchor for other enzymes in styrene degradation pathway.

Importance: Styrene oxide isomerase (SOI) catalyzes the isomerization of styrene oxide into phenylacetaldehyde in the side chain oxygenation of the styrene degradation pathway. Despite performing a key role in this pathway, the biology and biochemistry of this enzyme are poorly understood, particularly its catalytic mechanism, membrane localization, and structure-function relationships. SOIs from Rhodococcus opacus and Zavarzinia compransoris were produced as SUMO/sfGFP/mCherry fusion proteins. We successfully achieved the overproduction and performed site-directed mutagenesis to understand the catalytic mechanism, performed whole-cell assays, used fluorescent microscopy to assess the membrane localization, and constructed terminal truncations to assess structure-function relationships. The site-directed mutagenesis revealed histidine-57 as the axial ligand for heme. The fluorescence microscopy of sfGFP-fusion showed that SOI is a membrane-bound protein with both termini localized in the cytosol. The difference in activity of differently tagged SOI and truncation of the terminal extension showed that the termini might facilitate proper substrate channelling.

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来源期刊
Microbiology spectrum
Microbiology spectrum Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.20
自引率
5.40%
发文量
1800
期刊介绍: Microbiology Spectrum publishes commissioned review articles on topics in microbiology representing ten content areas: Archaea; Food Microbiology; Bacterial Genetics, Cell Biology, and Physiology; Clinical Microbiology; Environmental Microbiology and Ecology; Eukaryotic Microbes; Genomics, Computational, and Synthetic Microbiology; Immunology; Pathogenesis; and Virology. Reviews are interrelated, with each review linking to other related content. A large board of Microbiology Spectrum editors aids in the development of topics for potential reviews and in the identification of an editor, or editors, who shepherd each collection.
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