集体编码信息中错误的抑制。

ArXiv Pub Date : 2025-09-24
Martin J Falk, Leon Zhou, Yoshiya J Matsubara, Kabir Husain, Jack W Szostak, Arvind Murugan
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引用次数: 0

摘要

现代生活在很大程度上通过复制单个物理完整的编码信息的分子将遗传信息从母亲传递给女儿。然而,复制一个延伸的分子需要高度的复制机制和高保真度,以避免错误灾难与基因组大小成比例。在这里,我们在另一种架构中探索这些保真度要求,即虚拟圆形基因组,其中没有一个物理分子编码完整的遗传信息。相反,信息是在一组重叠和相互作用的片段中编码和传输的。利用DNA低聚物的复杂混合物的模型实验系统,可以部分退火和相互延伸,我们发现突变低聚物相对于没有集体编码的模型被抑制。通过模拟和理论,我们表明这种突变体的抑制可以通过对生产性结合伴侣的竞争来解释。因此,即使突变率高于物理完整基因组的错误灾难,信息也可以在虚拟的圆形基因组中健壮地传播。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Suppression of errors in collectively coded information.

Suppression of errors in collectively coded information.

Suppression of errors in collectively coded information.

Suppression of errors in collectively coded information.

Modern life largely transmits genetic information from mother to daughter through the duplication of single physically intact molecules that encode information. However, copying an extended molecule requires complex copying machinery and high fidelity that scales with the genome size to avoid the error catastrophe. Here, we explore these fidelity requirements in an alternative architecture, the virtual circular genome, in which no one physical molecule encodes the full genetic information. Instead, information is encoded and transmitted in a collective of overlapping and interacting segments. Using a model experimental system of a complex mixture of DNA oligomers that can partly anneal and extend off each other, we find that mutant oligomers are suppressed relative to a model without collective encoding. Through simulations and theory, we show that this suppression of mutants can be explained by competition for productive binding partners. As a consequence, information can be propagated robustly in a virtual circular genome even at mutation rates expected under prebiotic conditions.

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