来自国际疾病统计分类转换器的nordecline双向编码器表示的领域特定预训练,第十版,挪威临床文本中的代码预测:模型开发和评估研究。

IF 2
JMIR AI Pub Date : 2025-08-25 DOI:10.2196/66153
Phuong Dinh Ngo, Miguel Ángel Tejedor Hernández, Taridzo Chomutare, Andrius Budrionis, Therese Olsen Svenning, Torbjørn Torsvik, Anastasios Lamproudis, Hercules Dalianis
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引用次数: 0

摘要

背景:准确分配ICD-10(国际疾病统计分类,第十版)代码对临床文件、报销流程、流行病学研究和卫生保健计划至关重要。手工编码既耗时又费力,而且容易出错,因此强调了在挪威医疗保健系统中需要自动化解决方案。自然语言处理(NLP)和基于转换器的语言模型的最新进展在几种语言的ICD(国际疾病分类)编码自动化方面显示出有希望的结果。然而,先前的工作主要集中在英语和其他资源丰富的语言上,在挪威特定的临床NLP研究中留下了空白。目的:本研究介绍了两个版本的NorDeClin- bert (NorDeClin Bidirectional Encoder Representations from Transformers),这些基于特定领域的挪威语bert模型在一个大型挪威临床文本语料库上进行了预训练,以增强它们对医学语言的理解。随后对这两个模型进行微调以预测ICD-10诊断代码。我们的目的是评估特定领域预训练和模型大小对分类性能的影响,并将NorDeClin-BERT与挪威ICD-10编码背景下的通用和跨语言BERT模型进行比较。方法:两个版本的nordecline - bert在ClinCode Gastro语料库(一个包含880万未识别挪威临床记录的大型数据集)上进行预训练,以增强特定领域的语言建模。基本模型建立在NorBERT3-base基础上,并在语料库的一个大型相关子集上进行预训练,而大型模型建立在NorBERT3-large基础上,并在完整数据集上进行训练。使用标准评估指标:准确性、精密度、召回率和f1分数,对两种模型进行了SweDeClin-BERT、ScandiBERT、NorBERT3-base和NorBERT3-large的基准测试。结果:结果表明,两个版本的nordecline -BERT在分类流行和不常见的ICD-10代码方面都优于通用的挪威BERT模型和瑞典临床BERT模型。值得注意的是,nordecline - bert -large在评估指标中取得了最高的总体表现,证明了挪威语中特定领域临床预训练的影响。这些结果表明,与在临床文本上预训练的通用领域挪威模型和瑞典模型相比,针对挪威临床文本的特定领域预训练与模型容量相结合,提高了ICD-10分类精度。此外,虽然瑞典临床模型显示出挪威的一些可转移性,但它们的表现仍然不理想,强调了挪威特定临床预训练的必要性。结论:本研究强调了NorDeClin-BERT在改善挪威胃肠病学领域ICD-10编码分类方面的潜力,最终简化了临床文件、报告流程,减轻了行政负担,并提高了挪威卫生保健机构的编码准确性。基准评估建立了nordecline - bert作为处理挪威临床文本和预测ICD-10编码的最先进模型,为挪威医学NLP的未来研究建立了新的基线。未来的工作可能会进一步探索领域适应技术、外部知识整合和跨医院的通用性,以提高ICD编码在更广泛的临床环境中的性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Domain-Specific Pretraining of NorDeClin-Bidirectional Encoder Representations From Transformers for <i>International Statistical Classification of Diseases, Tenth Revision,</i> Code Prediction in Norwegian Clinical Texts: Model Development and Evaluation Study.

Domain-Specific Pretraining of NorDeClin-Bidirectional Encoder Representations From Transformers for <i>International Statistical Classification of Diseases, Tenth Revision,</i> Code Prediction in Norwegian Clinical Texts: Model Development and Evaluation Study.

Domain-Specific Pretraining of NorDeClin-Bidirectional Encoder Representations From Transformers for <i>International Statistical Classification of Diseases, Tenth Revision,</i> Code Prediction in Norwegian Clinical Texts: Model Development and Evaluation Study.

Domain-Specific Pretraining of NorDeClin-Bidirectional Encoder Representations From Transformers for International Statistical Classification of Diseases, Tenth Revision, Code Prediction in Norwegian Clinical Texts: Model Development and Evaluation Study.

Background: Accurately assigning ICD-10 (International Statistical Classification of Diseases, Tenth Revision) codes is critical for clinical documentation, reimbursement processes, epidemiological studies, and health care planning. Manual coding is time-consuming, labor-intensive, and prone to errors, underscoring the need for automated solutions within the Norwegian health care system. Recent advances in natural language processing (NLP) and transformer-based language models have shown promising results in automating ICD (International Classification of Diseases) coding in several languages. However, prior work has focused primarily on English and other high-resource languages, leaving a gap in Norwegian-specific clinical NLP research.

Objective: This study introduces 2 versions of NorDeClin-BERT (NorDeClin Bidirectional Encoder Representations from Transformers), domain-specific Norwegian BERT-based models pretrained on a large corpus of Norwegian clinical text to enhance their understanding of medical language. Both models were subsequently fine-tuned to predict ICD-10 diagnosis codes. We aimed to evaluate the impact of domain-specific pretraining and model size on classification performance and to compare NorDeClin-BERT with general-purpose and cross-lingual BERT models in the context of Norwegian ICD-10 coding.

Methods: Two versions of NorDeClin-BERT were pretrained on the ClinCode Gastro Corpus, a large-scale dataset comprising 8.8 million deidentified Norwegian clinical notes, to enhance domain-specific language modeling. The base model builds upon NorBERT3-base and was pretrained on a large, relevant subset of the corpus, while the large model builds upon NorBERT3-large and was trained on the full dataset. Both models were benchmarked against SweDeClin-BERT, ScandiBERT, NorBERT3-base, and NorBERT3-large, using standard evaluation metrics: accuracy, precision, recall, and F1-score.

Results: The results show that both versions of NorDeClin-BERT outperformed general-purpose Norwegian BERT models and Swedish clinical BERT models in classifying both prevalent and less common ICD-10 codes. Notably, NorDeClin-BERT-large achieved the highest overall performance across evaluation metrics, demonstrating the impact of domain-specific clinical pretraining in Norwegian. These results highlight that domain-specific pretraining on Norwegian clinical text, combined with model capacity, improves ICD-10 classification accuracy compared with general-domain Norwegian models and Swedish models pretrained on clinical text. Furthermore, while Swedish clinical models demonstrated some transferability to Norwegian, their performance remained suboptimal, emphasizing the necessity of Norwegian-specific clinical pretraining.

Conclusions: This study highlights the potential of NorDeClin-BERT to improve ICD-10 code classification for the gastroenterology domain in Norway, ultimately streamlining clinical documentation, reporting processes, reducing administrative burden, and enhancing coding accuracy in Norwegian health care institutions. The benchmarking evaluation establishes NorDeClin-BERT as a state-of-the-art model for processing Norwegian clinical text and predicting ICD-10 coding, establishing a new baseline for future research in Norwegian medical NLP. Future work may explore further domain adaptation techniques, external knowledge integration, and cross-hospital generalizability to enhance ICD coding performance across broader clinical settings.

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