{"title":"台湾蝎科(Teleostei: Scorpaeniformes)的清单及DNA条形码。","authors":"Tak-Kei Chou, Wen-Chien Huang, Wei-Cheng Jhuang, Te-Yu Liao","doi":"10.6620/ZS.2024.63-37","DOIUrl":null,"url":null,"abstract":"<p><p>Species of the family Scorpaenidae are easily misidentified due to their similar appearances, a result of camouflaging to their surroundings. In recent years, many species from this family have been described, and generic placements of some species have been revised. Previously, there were 80 species belonging to 29 genera of the Scorpaenidae recorded in Taiwanese waters. However, their taxonomy has not been revised for decades. It is necessary to update the checklist of the Scorpaenidae occurring in Taiwanese waters based on updated morphological and molecular data. In the present study, we revised the Taiwanese scorpaenids based on 296 specimens and updated the checklist, amounting to a total of 85 species of 29 genera, of which <i>Sebastapistes mauritiana</i> (Cuvier) is a new record, and three species from the genera <i>Phenacoscorpius</i>, <i>Scorpaenopsis</i>, and <i>Sebastapistes</i> are unable to be identified to any species. Using molecular analysis, we conducted the first comprehensive DNA barcoding study of the Scorpaenidae from Taiwanese waters based on a partial cytochrome <i>c</i> oxidase I (<i>COI</i>) gene of 655 bps. A total of 118 <i>COI</i> sequences were generated from voucher specimens of 66 species (28 genera) identified based on morphological characters. The <i>COI</i> sequences of <i>Parascorpaena maculipinnis</i>, <i>Scorpaena pepo</i>, and <i>Scorpaenopsis orientalis</i> are new to online databases. According to the Kimura-2 Parameter (K2P) genetic distance, the mean interspecific variation (15.61%) was distinctly greater than the mean intraspecific variation (0.22%), suggesting a barcoding gap. The maximum likelihood tree showed that all lineages were supported by high bootstrap values.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":"63 ","pages":"e37"},"PeriodicalIF":1.4000,"publicationDate":"2024-12-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12399982/pdf/","citationCount":"0","resultStr":"{\"title\":\"Checklist and DNA Barcoding of the Scorpaenidae (Teleostei: Scorpaeniformes) in Taiwan.\",\"authors\":\"Tak-Kei Chou, Wen-Chien Huang, Wei-Cheng Jhuang, Te-Yu Liao\",\"doi\":\"10.6620/ZS.2024.63-37\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Species of the family Scorpaenidae are easily misidentified due to their similar appearances, a result of camouflaging to their surroundings. In recent years, many species from this family have been described, and generic placements of some species have been revised. Previously, there were 80 species belonging to 29 genera of the Scorpaenidae recorded in Taiwanese waters. However, their taxonomy has not been revised for decades. It is necessary to update the checklist of the Scorpaenidae occurring in Taiwanese waters based on updated morphological and molecular data. In the present study, we revised the Taiwanese scorpaenids based on 296 specimens and updated the checklist, amounting to a total of 85 species of 29 genera, of which <i>Sebastapistes mauritiana</i> (Cuvier) is a new record, and three species from the genera <i>Phenacoscorpius</i>, <i>Scorpaenopsis</i>, and <i>Sebastapistes</i> are unable to be identified to any species. Using molecular analysis, we conducted the first comprehensive DNA barcoding study of the Scorpaenidae from Taiwanese waters based on a partial cytochrome <i>c</i> oxidase I (<i>COI</i>) gene of 655 bps. A total of 118 <i>COI</i> sequences were generated from voucher specimens of 66 species (28 genera) identified based on morphological characters. The <i>COI</i> sequences of <i>Parascorpaena maculipinnis</i>, <i>Scorpaena pepo</i>, and <i>Scorpaenopsis orientalis</i> are new to online databases. According to the Kimura-2 Parameter (K2P) genetic distance, the mean interspecific variation (15.61%) was distinctly greater than the mean intraspecific variation (0.22%), suggesting a barcoding gap. The maximum likelihood tree showed that all lineages were supported by high bootstrap values.</p>\",\"PeriodicalId\":49331,\"journal\":{\"name\":\"Zoological Studies\",\"volume\":\"63 \",\"pages\":\"e37\"},\"PeriodicalIF\":1.4000,\"publicationDate\":\"2024-12-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12399982/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Zoological Studies\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.6620/ZS.2024.63-37\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"ZOOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Zoological Studies","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.6620/ZS.2024.63-37","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"ZOOLOGY","Score":null,"Total":0}
Checklist and DNA Barcoding of the Scorpaenidae (Teleostei: Scorpaeniformes) in Taiwan.
Species of the family Scorpaenidae are easily misidentified due to their similar appearances, a result of camouflaging to their surroundings. In recent years, many species from this family have been described, and generic placements of some species have been revised. Previously, there were 80 species belonging to 29 genera of the Scorpaenidae recorded in Taiwanese waters. However, their taxonomy has not been revised for decades. It is necessary to update the checklist of the Scorpaenidae occurring in Taiwanese waters based on updated morphological and molecular data. In the present study, we revised the Taiwanese scorpaenids based on 296 specimens and updated the checklist, amounting to a total of 85 species of 29 genera, of which Sebastapistes mauritiana (Cuvier) is a new record, and three species from the genera Phenacoscorpius, Scorpaenopsis, and Sebastapistes are unable to be identified to any species. Using molecular analysis, we conducted the first comprehensive DNA barcoding study of the Scorpaenidae from Taiwanese waters based on a partial cytochrome c oxidase I (COI) gene of 655 bps. A total of 118 COI sequences were generated from voucher specimens of 66 species (28 genera) identified based on morphological characters. The COI sequences of Parascorpaena maculipinnis, Scorpaena pepo, and Scorpaenopsis orientalis are new to online databases. According to the Kimura-2 Parameter (K2P) genetic distance, the mean interspecific variation (15.61%) was distinctly greater than the mean intraspecific variation (0.22%), suggesting a barcoding gap. The maximum likelihood tree showed that all lineages were supported by high bootstrap values.
期刊介绍:
Zoological Studies publishes original research papers in five major fields: Animal Behavior, Comparative Physiology, Evolution, Ecology, and Systematics and Biogeography. Manuscripts are welcome from around the world and must be written in English. When the manuscript concerns the use of animals or specimens in research, a statement must be included to the effect that the author(s) has adhered to the legal requirements of the country in which the work was carried out or to any institutional guidelines.