[使用真实世界数据、计算机建模和网络药理学的综合药物发现策略]。

Hirofumi Hamano, Yuta Tanaka, Yoshito Zamami
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引用次数: 0

摘要

本研究评估了综合药物发现策略的效用,该策略结合了三种新兴的数据驱动方法:现实世界数据分析、计算机筛选和网络药理学。首先,分析来自公共基因表达数据库的转录组数据和不良事件报告,以解决免疫检查点抑制剂诱导的心肌炎。研究结果表明,非甾体抗炎药具有预防作用,特别是针对花生四烯酸代谢途径的药物。其次,为了确定曲妥珠单抗耐药her2阳性乳腺癌的治疗方案,采用了化学信息学方法。机器学习分类模型和基于结构的对接模拟实现了批准药物的高效硅筛选,鉴定出新的YES1激酶抑制剂。第三,基于网络的分析评估了药物性周围神经病变中疾病相关基因模块和他汀类药物诱导的基因模块之间的拓扑距离。该分析表明,某些他汀类药物可能通过调节共同靶点和神经退行性通路来预防药物诱导的周围神经病变。这些发现表明,整合异构数据模式-从转录组学和化学结构到蛋白质-蛋白质相互作用网络和现实世界的临床观察-可以发现重新定位候选药物和降低风险的治疗方法。该研究强调了构建以疗效和安全性为目标的转化药物发现框架的多层数据驱动策略的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[An integrative drug discovery strategy using real-world data, in silico modeling, and network pharmacology].

This study evaluated the utility of an integrated drug discovery strategy that combines three emerging data-driven approaches: real-world data analysis, in silico screening, and network pharmacology. First, transcriptomic data from public gene expression databases and adverse event reports were analyzed to address myocarditis induced by immune checkpoint inhibitors. The findings suggested a preventive effect of non-steroidal anti-inflammatory drugs, particularly those targeting the arachidonic acid metabolism pathway. Second, to identify therapeutic options for trastuzumab-resistant HER2-positive breast cancer, a cheminformatics approach was applied. A machine learning classification model and structure-based docking simulations enabled efficient in silico screening of approved drugs, identifying novel YES1 kinase inhibitors. Third, network-based analysis evaluated the topological distance between disease-associated gene modules and statin-induced gene modules in drug-induced peripheral neuropathy. This analysis indicated that certain statins may protect against drug-induced peripheral neuropathy through modulation of shared targets and neurodegenerative pathways. These findings demonstrate that integrating heterogeneous data modalities-from transcriptomics and chemical structure to protein-protein interaction networks and real-world clinical observations-can enable the discovery of repositioning candidates and risk-mitigating therapies. The study highlights the potential of multi-layered, data-driven strategies in constructing translational drug discovery frameworks aimed at both efficacy and safety.

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来源期刊
Folia Pharmacologica Japonica
Folia Pharmacologica Japonica Pharmacology, Toxicology and Pharmaceutics-Pharmacology
CiteScore
0.40
自引率
0.00%
发文量
132
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