{"title":"用PCR扩增子直接转染同源重组产生重组mimivirus。","authors":"Hiroyuki Hikida, Hiroyuki Ogata","doi":"10.1016/j.jmb.2025.169404","DOIUrl":null,"url":null,"abstract":"<div><div>Giant viruses are large double-stranded DNA viruses encoding hundreds of genes. These genes are considered to reprogram the host cell machinery, which, in turn, modulates the global nutrient cycles in the environment. However, the functions of giant-virus genes are largely unknown due to the limited molecular biology tools. Recently, reverse-genetics systems have been developed in giant viruses infecting a free-living amoeba, <em>Acanthamoeba castellanii</em>. One of the methods relies on homologous recombination by plasmid transfection, but plasmid construction is generally laborious. In this study, we developed a modified method to generate a recombinant giant virus, mimivirus, with direct transfection of a PCR amplicon into host cells, a widely used approach in budding yeast and other organisms. Consequently, we successfully generated a recombinant mimivirus with a marker gene. Our results demonstrated that a bacterium-free method could be applied to giant viruses to generate recombinants, accelerating further experimental studies related to these viruses.</div></div>","PeriodicalId":369,"journal":{"name":"Journal of Molecular Biology","volume":"437 21","pages":"Article 169404"},"PeriodicalIF":4.5000,"publicationDate":"2025-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Generation of a Recombinant Mimivirus by Homologous Recombination Using Direct Transfection of a PCR Amplicon\",\"authors\":\"Hiroyuki Hikida, Hiroyuki Ogata\",\"doi\":\"10.1016/j.jmb.2025.169404\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Giant viruses are large double-stranded DNA viruses encoding hundreds of genes. These genes are considered to reprogram the host cell machinery, which, in turn, modulates the global nutrient cycles in the environment. However, the functions of giant-virus genes are largely unknown due to the limited molecular biology tools. Recently, reverse-genetics systems have been developed in giant viruses infecting a free-living amoeba, <em>Acanthamoeba castellanii</em>. One of the methods relies on homologous recombination by plasmid transfection, but plasmid construction is generally laborious. In this study, we developed a modified method to generate a recombinant giant virus, mimivirus, with direct transfection of a PCR amplicon into host cells, a widely used approach in budding yeast and other organisms. Consequently, we successfully generated a recombinant mimivirus with a marker gene. Our results demonstrated that a bacterium-free method could be applied to giant viruses to generate recombinants, accelerating further experimental studies related to these viruses.</div></div>\",\"PeriodicalId\":369,\"journal\":{\"name\":\"Journal of Molecular Biology\",\"volume\":\"437 21\",\"pages\":\"Article 169404\"},\"PeriodicalIF\":4.5000,\"publicationDate\":\"2025-08-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Molecular Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S002228362500470X\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Biology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S002228362500470X","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Generation of a Recombinant Mimivirus by Homologous Recombination Using Direct Transfection of a PCR Amplicon
Giant viruses are large double-stranded DNA viruses encoding hundreds of genes. These genes are considered to reprogram the host cell machinery, which, in turn, modulates the global nutrient cycles in the environment. However, the functions of giant-virus genes are largely unknown due to the limited molecular biology tools. Recently, reverse-genetics systems have been developed in giant viruses infecting a free-living amoeba, Acanthamoeba castellanii. One of the methods relies on homologous recombination by plasmid transfection, but plasmid construction is generally laborious. In this study, we developed a modified method to generate a recombinant giant virus, mimivirus, with direct transfection of a PCR amplicon into host cells, a widely used approach in budding yeast and other organisms. Consequently, we successfully generated a recombinant mimivirus with a marker gene. Our results demonstrated that a bacterium-free method could be applied to giant viruses to generate recombinants, accelerating further experimental studies related to these viruses.
期刊介绍:
Journal of Molecular Biology (JMB) provides high quality, comprehensive and broad coverage in all areas of molecular biology. The journal publishes original scientific research papers that provide mechanistic and functional insights and report a significant advance to the field. The journal encourages the submission of multidisciplinary studies that use complementary experimental and computational approaches to address challenging biological questions.
Research areas include but are not limited to: Biomolecular interactions, signaling networks, systems biology; Cell cycle, cell growth, cell differentiation; Cell death, autophagy; Cell signaling and regulation; Chemical biology; Computational biology, in combination with experimental studies; DNA replication, repair, and recombination; Development, regenerative biology, mechanistic and functional studies of stem cells; Epigenetics, chromatin structure and function; Gene expression; Membrane processes, cell surface proteins and cell-cell interactions; Methodological advances, both experimental and theoretical, including databases; Microbiology, virology, and interactions with the host or environment; Microbiota mechanistic and functional studies; Nuclear organization; Post-translational modifications, proteomics; Processing and function of biologically important macromolecules and complexes; Molecular basis of disease; RNA processing, structure and functions of non-coding RNAs, transcription; Sorting, spatiotemporal organization, trafficking; Structural biology; Synthetic biology; Translation, protein folding, chaperones, protein degradation and quality control.