整理和可视化分析方法和开放光谱数据库的化学功能使用分类。

IF 5.3 2区 化学 Q1 CHEMISTRY, MEDICINAL
E. Tyler Carr, Gregory Janesch, Nathaniel Charest, Michael Zurek-Ost, Katherine Phillips, Kristin Isaacs and Antony J. Williams*, 
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引用次数: 0

摘要

在此,我们报告了一个新的化学功能分类法(ChemFuncT)的发展,对超过21,000种化学物质的功能用途进行了分类,这些化学物质是从四个公开来源以编程方式汇总的。数以千计的来源化学类别被统一成一个由大约300个分类组成的等级分类法。该分类法是专门为允许在EPA的分析方法和开放光谱(AMOS)数据库和web应用程序中托管的文件进行注释而开发的。交互式可视化集成到AMOS网络界面,方便用户识别分析方法和化学事实表对应的化学功能用途。除了分析方法发现,ChemFuncT还通过提供结构化分类数据和简化的化学功能角色识别,支持化学暴露建模和产品安全评估。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Curating and Visualizing the Analytical Methods and the Open Spectral Database’s Chemical Functional Use Taxonomy

Curating and Visualizing the Analytical Methods and the Open Spectral Database’s Chemical Functional Use Taxonomy

Herein, we report on the development of a new Chemical Function Taxonomy (ChemFuncT), categorizing functional uses for over 21,000 chemicals that were programmatically aggregated from four publicly available sources. Thousands of sourced chemical categories were harmonized into a hierarchical taxonomy comprising approximately 300 classifications. The taxonomy was developed specifically to allow for annotation of documents hosted in EPA’s Analytical Methods and Open Spectra (AMOS) database and web application. An interactive visualization integrated into the AMOS web interface facilitates user identification of both analytical methods and chemical fact sheets corresponding to chemical functional uses. Beyond analytical method discovery, ChemFuncT supports chemical exposure modeling and product safety assessment by providing structured classification data and streamlined identification of chemical functional roles.

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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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